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OX241572.1__CAH9016310.1__VP275E431_P0043__00043

Bact-Vir

OX241572.1__CAH9016310.1__VP275E431_P0043__00043

Identity

Accession:
OX241572 ↗
Kingdom:
phage

Quality

78.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Vibrio_phage_275E43-1

TaxID: 2963184

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-52
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.88 65.0 5.54e-01 100.0% 50.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 61.0 5.76e-01 100.0% 69.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 61.0 5.67e-01 100.0% 66.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 59.0 5.04e-01 100.0% 49.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 5.05e-01 100.0% 56.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 55.0 5.49e-01 100.0% 78.3%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 57.0 5.29e-01 100.0% 70.4%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.17e-01 100.0% 63.9%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.69 57.0 4.43e-01 100.0% 69.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 4.46e-01 100.0% 57.6%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 3.63e-01 100.0% 53.9%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 51.0 3.39e-01 100.0% 65.7%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.36e-01 100.0% 63.2%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.50e-01 100.0% 79.4%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.36e-01 100.0% 64.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.60 47.0 3.69e-01 90.9% 61.0%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 49.0 3.31e-01 100.0% 68.1%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 48.0 3.33e-01 100.0% 64.6%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.58 47.0 3.42e-01 100.0% 32.9%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 3.41e-01 100.0% 33.9%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.40e-01 100.0% 83.0%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 42.0 3.27e-01 100.0% 79.0%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 45.0 3.89e-01 100.0% 92.6%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.55 46.0 3.36e-01 100.0% 50.7%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 41.0 4.08e-01 84.1% 87.0%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 44.0 2.90e-01 97.7% 35.7%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.89e-01 100.0% 71.2%
3azoA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 45.0 2.84e-01 100.0% 37.1%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 40.0 3.39e-01 93.2% 49.0%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 3.52e-01 100.0% 43.6%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.54 45.0 3.07e-01 100.0% 38.3%
3iiiA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 2.79e-01 100.0% 39.5%
1ihjA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 44.0 3.54e-01 100.0% 79.8%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 42.0 3.38e-01 93.2% 47.0%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.51 40.0 2.84e-01 90.9% 72.2%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.51 39.0 3.63e-01 88.6% 67.2%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.51 40.0 3.56e-01 100.0% 58.4%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 40.0 3.12e-01 90.9% 86.7%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 39.0 2.77e-01 100.0% 55.6%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 63.0 5.05e-01 100.0% 43.5%
3614175 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 61.0 4.53e-01 81.8% 33.6%
3938389 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 62.0 5.00e-01 100.0% 43.5%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 62.0 4.89e-01 100.0% 41.1%
3520654 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.80 66.0 4.49e-01 100.0% 26.7%
4958339 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.79 63.0 4.69e-01 100.0% 35.5%
3712782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 63.0 5.13e-01 100.0% 48.8%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 70.0 6.05e-01 100.0% 76.9%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 59.0 4.95e-01 100.0% 48.8%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.76 64.0 5.34e-01 100.0% 53.8%
3595833 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 68.0 5.22e-01 100.0% 52.6%
3709279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.30e-01 100.0% 56.7%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.50e-01 100.0% 60.0%
4140958 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 64.0 5.38e-01 100.0% 58.7%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 62.0 5.35e-01 100.0% 61.4%
3572964 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 59.0 3.94e-01 100.0% 24.2%
3290160 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.71 57.0 4.78e-01 100.0% 51.2%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.61e-01 100.0% 71.7%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.18e-01 100.0% 70.9%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.06e-01 100.0% 62.7%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.00e-01 100.0% 66.7%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.68 56.0 4.81e-01 100.0% 57.3%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 58.0 4.81e-01 100.0% 63.7%
5016488 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.26e-01 100.0% 86.7%
5065362 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 53.0 3.21e-01 95.5% 34.5%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.65 55.0 3.96e-01 100.0% 69.9%
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 57.0 4.04e-01 100.0% 32.6%
4373611 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.61 53.0 3.57e-01 100.0% 32.6%
3720872 1.1.5.36 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like 0.61 49.0 3.38e-01 100.0% 59.5%
1088178 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.61 49.0 3.30e-01 100.0% 62.3%
3995673 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 37.0 2.69e-01 70.5% 20.8%
3611892 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.60 52.0 3.43e-01 100.0% 37.4%
4943257 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.58 46.0 2.82e-01 90.9% 45.6%
3507580 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 44.0 2.88e-01 90.9% 19.5%