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OX241574.1__CAH9015655.1__VP242E401_P0011__00011
Bact-VirOX241574.1__CAH9015655.1__VP242E401_P0011__00011
Identity
- Accession:
- OX241574 ↗
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-118
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gd5A00 | 6.10.140.1230 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 65.0 | 4.69e-01 | 98.0% | 33.1% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.69 | 55.0 | 5.54e-01 | 90.0% | 88.2% |
D2
medium
residues 119-191
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.63 | 44.0 | 3.70e-01 | 90.4% | 43.1% |
| 1vlaA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 25.0 | 3.15e-01 | 86.3% | 57.1% |
| 2dkhA03 | 3.40.30.20 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain | 0.59 | 51.0 | 3.72e-01 | 100.0% | 64.3% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.57 | 44.0 | 4.58e-01 | 93.2% | 93.9% |
| 5suvC00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.54 | 41.0 | 3.54e-01 | 84.9% | 63.2% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 2.83e-01 | 95.9% | 69.3% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 44.0 | 3.06e-01 | 100.0% | 38.4% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.65e-01 | 91.8% | 92.7% |
| 1w94A00 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.52 | 44.0 | 3.58e-01 | 100.0% | 72.3% |
| 1rypA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 42.0 | 2.97e-01 | 91.8% | 28.0% |
| 2iq1A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 43.0 | 3.01e-01 | 95.9% | 84.4% |
| 1ju2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.77e-01 | 93.2% | 93.1% |
| 4lb0A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 36.0 | 2.89e-01 | 76.7% | 63.4% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 40.0 | 3.23e-01 | 87.7% | 45.8% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.94e-01 | 82.2% | 98.5% |
| 4rz0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.50 | 35.0 | 3.12e-01 | 97.3% | 47.4% |
| 1aroP05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.50 | 37.0 | 2.73e-01 | 79.5% | 42.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3656728 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.71 | 53.0 | 5.67e-01 | 90.4% | 100.0% |
| 3518078 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 40.0 | 4.81e-01 | 84.9% | 100.0% |
| 4054953 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.65 | 51.0 | 4.23e-01 | 84.9% | 70.0% |
| 3517205 | 7528.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I | 0.62 | 46.0 | 3.69e-01 | 80.8% | 57.3% |
| 3429387 | 386.1.1.6 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 | 0.62 | 38.0 | 4.55e-01 | 82.2% | 100.0% |
| 3638653 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.58 | 47.0 | 3.29e-01 | 94.5% | 96.7% |
| 4985280 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.57 | 48.0 | 4.82e-01 | 100.0% | 94.7% |
| 3328886 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.56 | 36.0 | 3.95e-01 | 78.1% | 85.5% |
| 3600582 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.56 | 41.0 | 2.76e-01 | 78.1% | 29.5% |
| 3675412 | 386.1.1.6 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 | 0.56 | 38.0 | 3.76e-01 | 80.8% | 65.0% |
| 3801966 | 252.1.1.2 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › DUF7028 | 0.55 | 45.0 | 4.48e-01 | 93.2% | 100.0% |
| 3300738 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.54 | 37.0 | 3.00e-01 | 71.2% | 72.0% |
| 3952923 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.54 | 46.0 | 4.22e-01 | 100.0% | 96.0% |
| 3439923 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.53 | 32.0 | 3.19e-01 | 84.9% | 54.7% |
| 4004760 | 64.1.1.5 ↗ | beta meanders › WW domain-like › WW domain › WW domain › DUF333 | 0.52 | 32.0 | 3.65e-01 | 74.0% | 100.0% |
| 4971539 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.52 | 43.0 | 4.35e-01 | 100.0% | 96.0% |
| 3743854 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.51 | 36.0 | 2.20e-01 | 72.6% | 62.0% |
| 5018724 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.51 | 38.0 | 3.52e-01 | 95.9% | 62.1% |
| 3973145 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 28.0 | 3.11e-01 | 71.2% | 67.3% |
| 4936469 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.51 | 44.0 | 3.02e-01 | 100.0% | 88.6% |
| 5028909 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 43.0 | 2.66e-01 | 98.6% | 25.7% |
| 3701149 | 3548.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 | 0.50 | 36.0 | 3.37e-01 | 78.1% | 70.5% |