←Back to structures
OX241574.1__CAH9016267.1__VP242E401_P0043__00043
Bact-VirOX241574.1__CAH9016267.1__VP242E401_P0043__00043
Identity
- Accession:
- OX241574 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-119
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.81 | 44.0 | 5.87e-01 | 87.0% | 98.4% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.77 | 44.0 | 5.52e-01 | 88.7% | 94.2% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.72 | 64.0 | 6.47e-01 | 93.9% | 96.4% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.69 | 47.0 | 5.48e-01 | 87.0% | 100.0% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 39.0 | 4.91e-01 | 88.7% | 100.0% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 42.0 | 4.66e-01 | 88.7% | 79.3% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 43.0 | 3.69e-01 | 89.6% | 42.8% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.65 | 47.0 | 4.98e-01 | 86.1% | 84.6% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.63 | 53.0 | 5.38e-01 | 90.4% | 94.8% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 3.94e-01 | 95.7% | 70.0% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.58 | 47.0 | 4.84e-01 | 90.4% | 92.7% |
| 1blxA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 40.0 | 4.43e-01 | 88.7% | 88.0% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 38.0 | 4.10e-01 | 90.4% | 81.7% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 35.0 | 4.18e-01 | 100.0% | 95.9% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.57 | 43.0 | 3.63e-01 | 91.3% | 47.2% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.56 | 49.0 | 4.35e-01 | 94.8% | 81.2% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 46.0 | 4.29e-01 | 90.4% | 81.0% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.51 | 45.0 | 4.10e-01 | 98.3% | 92.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 67.0 | 6.79e-01 | 89.6% | 98.2% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.74 | 54.0 | 5.87e-01 | 100.0% | 91.6% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.73 | 55.0 | 6.17e-01 | 89.6% | 100.0% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.72 | 59.0 | 6.25e-01 | 100.0% | 97.1% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 58.0 | 6.21e-01 | 93.0% | 98.0% |
| 3949274 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 65.0 | 6.51e-01 | 97.4% | 98.3% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 50.0 | 5.77e-01 | 86.1% | 98.8% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.70 | 50.0 | 5.78e-01 | 84.3% | 100.0% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.69 | 52.0 | 5.72e-01 | 87.8% | 96.7% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.68 | 50.0 | 5.59e-01 | 91.3% | 98.9% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.66 | 57.0 | 5.94e-01 | 93.9% | 99.0% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 56.0 | 5.76e-01 | 89.6% | 98.2% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.65 | 46.0 | 4.94e-01 | 86.1% | 84.8% |
| 4373808 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.64 | 47.0 | 4.80e-01 | 87.0% | 78.2% |
| 4600945 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 46.0 | 3.68e-01 | 88.7% | 38.6% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 43.0 | 4.69e-01 | 93.0% | 84.2% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 43.0 | 4.97e-01 | 87.8% | 100.0% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.63 | 54.0 | 5.58e-01 | 93.9% | 97.3% |
| 3649347 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.61 | 48.0 | 4.50e-01 | 88.7% | 67.6% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.61 | 42.0 | 3.63e-01 | 90.4% | 45.0% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.59 | 49.0 | 4.35e-01 | 90.4% | 82.9% |
| 4952354 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 48.0 | 3.44e-01 | 97.4% | 76.1% |
| 3936663 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 40.0 | 3.96e-01 | 77.4% | 85.6% |
| 3615884 | 11.1.1.1189 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › XRCC1_N | 0.54 | 32.0 | 4.01e-01 | 70.4% | 98.6% |
| 3576746 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.54 | 45.0 | 3.83e-01 | 90.4% | 56.2% |
| 3259730 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 43.0 | 4.39e-01 | 89.6% | 88.2% |
| 3484264 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 31.0 | 3.60e-01 | 71.3% | 87.5% |