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OX241576.1__CAH9016897.1__VP193E371_P0087__00087
Bact-VirOX241576.1__CAH9016897.1__VP193E371_P0087__00087
Identity
- Accession:
- OX241576 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-72
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1um8A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 44.0 | 4.08e-01 | 79.2% | 91.8% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.60 | 41.0 | 4.22e-01 | 70.8% | 80.6% |
| 2jp7A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 39.0 | 4.20e-01 | 72.2% | 94.7% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.56 | 37.0 | 3.41e-01 | 73.6% | 50.5% |
| 1z1vA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.56 | 38.0 | 3.88e-01 | 72.2% | 81.4% |
| 2ejsA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 38.0 | 4.06e-01 | 75.0% | 89.7% |
| 1sxjE02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 43.0 | 4.45e-01 | 90.3% | 98.4% |
| 2jujA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 35.0 | 3.84e-01 | 72.2% | 85.7% |
| 1ufzA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 38.0 | 4.08e-01 | 75.0% | 91.4% |
| 4p17A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.53 | 43.0 | 3.84e-01 | 94.4% | 75.5% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 41.0 | 4.28e-01 | 90.3% | 98.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3637304 | 103.1.1.2 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE | 0.65 | 46.0 | 4.69e-01 | 76.4% | 95.7% |
| 3726046 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 41.0 | 4.72e-01 | 80.6% | 98.0% |
| 2522080 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.62 | 39.0 | 3.31e-01 | 73.6% | 40.0% |
| 4017672 | 103.1.1.2 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE | 0.57 | 37.0 | 4.19e-01 | 70.8% | 89.1% |
| 3349824 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 41.0 | 3.89e-01 | 91.7% | 67.8% |
| 5024662 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.54 | 35.0 | 2.70e-01 | 75.0% | 28.0% |
| 3482776 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.51 | 37.0 | 3.82e-01 | 80.6% | 82.9% |
D2
medium
residues 73-154
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 41.0 | 3.82e-01 | 100.0% | 51.5% |
| 3d82A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 40.0 | 3.76e-01 | 100.0% | 52.9% |
| 1f53A00 | 2.60.20.30 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.62 | 40.0 | 3.99e-01 | 97.6% | 63.1% |
| 1xv2C01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.62 | 52.0 | 4.72e-01 | 98.8% | 68.5% |
| 1g8kA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 42.0 | 3.63e-01 | 72.0% | 89.6% |
| 4bt2A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.61 | 51.0 | 4.64e-01 | 100.0% | 67.5% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 42.0 | 4.07e-01 | 73.2% | 96.9% |
| 1qwrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 38.0 | 3.78e-01 | 98.8% | 59.6% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 53.0 | 3.94e-01 | 100.0% | 57.0% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 38.0 | 3.65e-01 | 73.2% | 100.0% |
| 4jzjC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 4.06e-01 | 100.0% | 84.3% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 48.0 | 3.52e-01 | 100.0% | 45.0% |
| 1fu0A00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.54 | 40.0 | 4.01e-01 | 100.0% | 77.0% |
| 1vajA02 | 3.30.1490.150 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 | 0.52 | 42.0 | 4.37e-01 | 97.6% | 100.0% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 40.0 | 3.89e-01 | 96.3% | 75.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 3.92e-01 | 90.2% | 100.0% |
| 1ktbA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 43.0 | 4.23e-01 | 93.9% | 84.6% |
| 2qnkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.10e-01 | 100.0% | 79.7% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 41.0 | 3.82e-01 | 93.9% | 91.7% |
| 5z0uA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 37.0 | 3.62e-01 | 87.8% | 72.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956333 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 41.0 | 3.45e-01 | 100.0% | 42.3% |
| 3229882 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.61 | 42.0 | 2.82e-01 | 72.0% | 87.1% |
| 2595014 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.61 | 42.0 | 3.41e-01 | 72.0% | 84.6% |
| 5045656 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.61 | 41.0 | 3.57e-01 | 70.7% | 93.2% |
| 3862470 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 3.87e-01 | 78.0% | 82.5% |
| 3985230 | 10.12.1.63 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom | 0.60 | 38.0 | 3.76e-01 | 98.8% | 60.0% |
| 1839933 | 10.12.1.60 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AUDH_Cupin | 0.59 | 39.0 | 3.48e-01 | 100.0% | 47.4% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.57 | 45.0 | 4.71e-01 | 100.0% | 94.7% |
| 5067107 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.55 | 42.0 | 4.18e-01 | 82.9% | 100.0% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.54 | 43.0 | 4.19e-01 | 100.0% | 80.0% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 43.0 | 3.99e-01 | 100.0% | 68.6% |
| 3735163 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 2.59e-01 | 84.1% | 71.1% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.52 | 40.0 | 3.59e-01 | 82.9% | 79.2% |
| 3754872 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.52 | 43.0 | 3.81e-01 | 90.2% | 67.5% |
| 3329474 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 45.0 | 2.98e-01 | 100.0% | 52.3% |
| 3949205 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.51 | 35.0 | 2.46e-01 | 73.2% | 83.3% |
| 4998900 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.51 | 41.0 | 3.90e-01 | 87.8% | 98.0% |
| 4072878 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.51 | 42.0 | 4.28e-01 | 98.8% | 92.5% |
| 4287411 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.51 | 40.0 | 4.06e-01 | 90.2% | 88.7% |
| 5025753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.71e-01 | 100.0% | 69.4% |