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OX241576.1__CAH9017492.1__VP193E371_P0238__00238

Bact-Vir

OX241576.1__CAH9017492.1__VP193E371_P0238__00238

Identity

Accession:
OX241576 ↗
Kingdom:
phage

Quality

96.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.75 63.0 6.03e-01 100.0% 80.6%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.72 63.0 5.01e-01 100.0% 95.2%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 61.0 5.67e-01 100.0% 73.7%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 61.0 5.60e-01 100.0% 73.7%
2zaiA04 2.60.40.3030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 62.0 4.77e-01 100.0% 61.4%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.69 61.0 5.45e-01 100.0% 97.6%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 57.0 5.01e-01 100.0% 93.3%
1lfwA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 54.0 4.59e-01 96.6% 100.0%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.66 53.0 3.19e-01 100.0% 13.0%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.65 51.0 3.85e-01 100.0% 35.7%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.64 50.0 5.07e-01 100.0% 88.3%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.63 49.0 2.96e-01 100.0% 12.3%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 55.0 5.23e-01 100.0% 83.1%
5aj3F00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.62 53.0 4.22e-01 96.6% 79.7%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.62 51.0 3.68e-01 98.3% 42.0%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.61 50.0 3.50e-01 100.0% 33.3%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.61 50.0 3.33e-01 100.0% 40.7%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.60 51.0 3.78e-01 100.0% 48.8%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 50.0 3.80e-01 94.9% 100.0%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 48.0 3.91e-01 100.0% 46.0%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 52.0 3.78e-01 100.0% 43.9%
1egjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 3.58e-01 100.0% 44.6%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 3.95e-01 100.0% 92.3%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 50.0 4.33e-01 100.0% 60.0%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 53.0 4.81e-01 100.0% 74.7%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 4.18e-01 100.0% 57.4%
7oocE01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.58 44.0 4.02e-01 86.4% 100.0%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 48.0 3.71e-01 100.0% 60.1%
1zoyB01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.57 48.0 4.02e-01 96.6% 81.1%
4rudA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.57 37.0 3.76e-01 96.6% 67.2%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.57 41.0 2.66e-01 78.0% 60.0%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 3.57e-01 100.0% 42.4%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.54e-01 100.0% 48.5%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 49.0 3.61e-01 100.0% 57.1%
4mkmA01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.43e-01 91.5% 74.0%
3icuA01 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.56 47.0 3.54e-01 100.0% 98.1%
2bs2B01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.56 47.0 4.01e-01 100.0% 81.1%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 45.0 3.11e-01 94.9% 83.0%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.55 50.0 3.79e-01 100.0% 48.1%
6p3xB01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 47.0 3.44e-01 100.0% 35.6%
1kf6B01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.55 45.0 3.82e-01 94.9% 83.7%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.55 46.0 3.75e-01 100.0% 95.9%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.55 43.0 3.69e-01 100.0% 51.4%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 41.0 3.11e-01 84.7% 42.6%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 44.0 3.64e-01 100.0% 55.3%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.53 45.0 3.01e-01 98.3% 99.2%
3b49A00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.53 45.0 3.20e-01 100.0% 54.9%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 47.0 3.82e-01 100.0% 57.9%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.65e-01 94.9% 61.5%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.47e-01 89.8% 85.5%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.53 44.0 3.57e-01 100.0% 81.1%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.52 43.0 3.61e-01 100.0% 51.8%
3kwlA01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.52 42.0 3.74e-01 98.3% 76.3%
6njyA01 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 3.38e-01 93.2% 100.0%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.51 41.0 3.76e-01 98.3% 71.9%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3508212 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.78 69.0 6.54e-01 100.0% 82.9%
3517068 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.76 66.0 6.42e-01 100.0% 89.2%
3929121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 58.0 4.61e-01 100.0% 42.6%
223776 3115.4.1.1 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.75 63.0 5.91e-01 100.0% 76.1%
5012895 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.74 62.0 6.37e-01 100.0% 98.2%
4013514 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.73 63.0 5.17e-01 100.0% 53.3%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.73 64.0 5.71e-01 100.0% 70.6%
4990637 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 63.0 5.61e-01 100.0% 68.7%
4983090 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 61.0 5.59e-01 100.0% 70.9%
2527501 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 61.0 5.05e-01 100.0% 53.8%
4128974 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 64.0 5.77e-01 100.0% 75.0%
5030993 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.70 60.0 5.44e-01 100.0% 70.0%
3892842 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.70 61.0 5.97e-01 100.0% 90.8%
4996027 304.139.1.2 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.70 60.0 3.93e-01 98.3% 82.7%
2831852 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.70 59.0 4.94e-01 100.0% 55.4%
5033281 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.68 60.0 5.89e-01 100.0% 95.4%
3519901 3369.1.1.0 beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.68 59.0 4.30e-01 100.0% 81.2%
4648475 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.67 57.0 5.76e-01 96.6% 98.3%
3280008 3115.1.1.2 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 0.67 58.0 5.10e-01 100.0% 81.1%
3896560 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.67 58.0 4.24e-01 100.0% 36.5%
3268156 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.66 49.0 3.58e-01 84.7% 28.6%
3577792 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.65 58.0 4.56e-01 100.0% 53.3%
3299532 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 56.0 4.55e-01 100.0% 51.8%
4332626 3532.1.1.0 alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase 0.65 56.0 3.24e-01 100.0% 9.9%
3382614 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 55.0 3.20e-01 100.0% 20.4%
3529423 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 55.0 4.30e-01 100.0% 78.5%
5010503 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.51e-01 100.0% 61.1%
3726266 3363.1.1.0 beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs 0.61 54.0 4.68e-01 98.3% 95.6%
3991293 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.07e-01 100.0% 44.8%
2106284 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.61 54.0 5.23e-01 100.0% 88.1%
1030893 11.26.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 › M3 0.60 51.0 3.77e-01 100.0% 48.6%
3999001 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.60 52.0 4.36e-01 100.0% 61.0%
4003316 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.60 52.0 4.13e-01 100.0% 52.0%
3338688 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.60 52.0 5.05e-01 100.0% 95.4%
1442666 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.59 53.0 4.77e-01 100.0% 72.8%
3732370 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.59 48.0 4.81e-01 100.0% 91.7%
3269973 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.58 49.0 4.29e-01 98.3% 97.9%
3350520 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.57 47.0 2.97e-01 100.0% 62.3%
3929299 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.57 49.0 3.33e-01 100.0% 33.5%
3211800 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 52.0 4.49e-01 100.0% 66.7%
4026196 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 46.0 4.65e-01 100.0% 98.3%
3273223 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.56 45.0 3.51e-01 91.5% 87.0%
3502329 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 49.0 4.31e-01 100.0% 85.6%
3515326 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.56 47.0 3.72e-01 100.0% 68.9%
3933050 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 46.0 3.04e-01 100.0% 23.4%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 47.0 3.89e-01 96.6% 64.5%
4028378 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.55 47.0 3.74e-01 100.0% 74.6%
3291129 3370.1.1.0 beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 0.55 47.0 4.18e-01 100.0% 82.0%
4932514 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.55 46.0 3.81e-01 100.0% 77.5%
3260499 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 3.79e-01 100.0% 55.0%
3619496 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 44.0 2.81e-01 100.0% 19.5%
3164234 205.1.1.100 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_2, Fer4_11 0.54 45.0 3.12e-01 93.2% 83.0%
4943952 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.56e-01 100.0% 45.0%
5028431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.27e-01 100.0% 78.8%
4677137 219.1.1.50 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 0.53 47.0 2.75e-01 100.0% 41.5%
3939070 11.1.1.1173 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.53 44.0 3.53e-01 100.0% 44.8%
3818089 10.2.1.82 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › C-JID 0.53 44.0 3.11e-01 100.0% 55.0%
3738514 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.53 42.0 3.21e-01 91.5% 80.0%
3268123 192.15.1.184 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › RA 0.53 42.0 3.70e-01 98.3% 72.4%
3222333 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.53 45.0 3.29e-01 100.0% 56.0%
3508657 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 37.0 2.63e-01 81.4% 34.3%
3625109 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.51 42.0 3.03e-01 98.3% 69.5%
3992476 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.51 41.0 3.26e-01 100.0% 53.8%
3923361 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 41.0 3.10e-01 98.3% 74.9%