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OX359470.1__CAI3971263.1__ORM20_00214__00209

Bact-Vir

OX359470.1__CAI3971263.1__ORM20_00214__00209

Identity

Accession:
OX359470 ↗
Kingdom:
phage

Quality

66.2 mean pLDDT

Taxonomy

Ochrobactrum_phage_ORM_20

TaxID: 2985243

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-179
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11649.13 best T4_neck-protein 32.4 8.60e-08 96.4% 45.7%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5lpeB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 33.0 4.40e-01 71.4% 78.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.70 40.0 4.62e-01 80.4% 76.2%
7pzoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 33.0 4.32e-01 71.4% 83.3%
2oq5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 34.0 4.27e-01 72.6% 79.8%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 40.0 4.27e-01 79.8% 68.7%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.64 42.0 5.10e-01 80.4% 100.0%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.62 39.0 4.70e-01 77.4% 97.2%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 36.0 4.15e-01 78.6% 80.6%
1r5bA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 30.0 4.12e-01 73.2% 96.6%
2zyrA02 2.60.40.2190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 29.0 3.72e-01 74.4% 87.2%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.55 34.0 4.21e-01 72.6% 97.1%
3fk4B01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.55 28.0 3.31e-01 77.4% 69.6%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.53 31.0 3.84e-01 72.0% 92.3%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 4.30e-01 87.5% 84.9%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.52 39.0 4.17e-01 78.6% 90.6%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288253 1.1.13.55 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 0.69 36.0 4.76e-01 72.6% 93.3%
4879695 1.1.13.29 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 0.66 51.0 5.69e-01 98.8% 100.0%
3943282 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 38.0 4.44e-01 79.8% 79.2%
4287081 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 38.0 4.34e-01 79.8% 76.8%
3428387 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.64 34.0 3.40e-01 72.6% 47.8%
3587815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 39.0 4.94e-01 79.8% 100.0%
4970796 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 38.0 4.84e-01 72.0% 100.0%
5040464 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 35.0 4.66e-01 72.6% 100.0%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.59 45.0 4.59e-01 78.6% 98.1%
2407461 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.58 35.0 3.91e-01 78.6% 76.3%
4189243 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 34.0 3.85e-01 79.8% 76.2%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.56 39.0 4.37e-01 80.4% 90.8%
3973696 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 34.0 3.89e-01 72.0% 84.0%
4372074 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.54 34.0 3.73e-01 73.8% 75.7%
3943681 1.1.13.47 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.53 39.0 4.17e-01 77.4% 98.7%
3973282 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.52 34.0 4.16e-01 73.2% 100.0%
3966310 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 27.0 3.46e-01 73.2% 87.4%
4625449 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 28.0 3.82e-01 85.1% 100.0%
4995820 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 38.0 4.31e-01 78.6% 100.0%
3609057 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 32.0 3.44e-01 79.2% 71.7%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.50 38.0 3.98e-01 79.2% 92.9%
3511720 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.50 39.0 3.27e-01 81.5% 66.6%
D2 medium residues 182-222
PDB