Back to structures

OX458330.1__CAI8716118.1__PHANIE_0130__00013

Bact-Vir

OX458330.1__CAI8716118.1__PHANIE_0130__00013

Identity

Accession:
OX458330 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-66
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.86 73.0 6.13e-01 95.8% 100.0%
2jveA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.80 66.0 5.74e-01 89.6% 91.5%
3tiiA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.74 56.0 5.10e-01 91.7% 61.5%
4gvbA00 3.30.70.440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Killer toxin KP6 alpha-subunit 0.73 56.0 4.88e-01 87.5% 96.1%
2cs4A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 59.0 4.76e-01 91.7% 46.3%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 48.0 3.71e-01 85.4% 30.7%
3au4A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.70 58.0 4.75e-01 97.9% 57.4%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 48.0 3.80e-01 85.4% 34.3%
2uwqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 55.0 4.57e-01 89.6% 50.0%
4p4tA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 54.0 3.30e-01 89.6% 14.9%
1rc6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 47.0 3.01e-01 85.4% 14.5%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 47.0 3.72e-01 85.4% 35.7%
1fviA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.67 51.0 4.47e-01 87.5% 55.7%
2n17A00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.67 49.0 4.79e-01 87.5% 71.4%
1qwrA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 46.0 3.76e-01 81.2% 38.2%
3laaA00 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.66 47.0 3.20e-01 75.0% 22.5%
3ttcA01 3.90.870.30 Alpha Beta › Alpha-Beta Complex › DHBP synthase › 0.66 49.0 3.22e-01 81.2% 56.6%
2vpvA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 45.0 3.67e-01 83.3% 36.2%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 46.0 3.81e-01 77.1% 51.6%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.65 53.0 4.74e-01 97.9% 89.2%
1pqsA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 47.0 4.21e-01 87.5% 54.5%
2r7kA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.63 49.0 4.64e-01 91.7% 82.0%
3m3gA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.62 51.0 3.89e-01 93.8% 50.0%
1txoB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.62 49.0 3.26e-01 95.8% 96.2%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 48.0 4.05e-01 87.5% 63.1%
2epkX01 3.30.160.230 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase 0.60 42.0 3.54e-01 72.9% 56.2%
3pihA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.59 44.0 4.03e-01 87.5% 65.3%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 3.82e-01 93.8% 59.6%
2dt8A01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 47.0 3.50e-01 97.9% 32.2%
2j8bA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.58 48.0 4.22e-01 95.8% 89.7%
3fysA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 46.0 3.41e-01 97.9% 43.8%
6nwmA01 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.58 47.0 3.38e-01 95.8% 56.1%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.58 47.0 3.61e-01 91.7% 39.3%
1v70A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 3.52e-01 87.5% 53.3%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 3.19e-01 87.5% 36.3%
7a1rA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 46.0 3.60e-01 97.9% 45.8%
3glkA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.56 41.0 4.03e-01 89.6% 74.6%
3jr7A02 2.20.28.50 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain 0.56 41.0 4.41e-01 79.2% 100.0%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.54 44.0 2.91e-01 100.0% 68.2%
6x5vA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.29e-01 91.7% 50.0%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.20e-01 95.8% 78.9%
7l5aA02 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.50 37.0 2.68e-01 83.3% 26.3%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708065 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.94 81.0 6.88e-01 91.7% 100.0%
5059796 4326.1.1.0 a+b two layers › ERH-like › ERH-like › ERH-like 0.86 71.0 6.24e-01 89.6% 66.7%
4934655 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.86 72.0 6.01e-01 91.7% 95.0%
4118694 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.79 62.0 5.38e-01 87.5% 98.7%
169110 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.78 64.0 5.68e-01 91.7% 91.4%
3218303 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.77 56.0 5.77e-01 87.5% 84.4%
3176986 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.77 67.0 5.52e-01 97.9% 57.6%
3483496 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.76 65.0 6.66e-01 97.9% 100.0%
3164150 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.76 65.0 4.20e-01 100.0% 40.9%
3801584 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.76 61.0 4.87e-01 93.8% 44.0%
3935405 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.75 63.0 5.18e-01 95.8% 54.4%
4410550 379.1.1.1 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.75 58.0 5.76e-01 87.5% 82.0%
3503544 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.75 62.0 4.78e-01 93.8% 41.8%
3399988 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.75 57.0 5.58e-01 85.4% 77.8%
3405569 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.75 62.0 4.83e-01 95.8% 47.3%
3993535 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.74 60.0 5.06e-01 89.6% 53.8%
None 0.74 58.0 3.95e-01 89.6% 42.6%
3404255 379.1.1.1 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.74 60.0 6.00e-01 91.7% 88.0%
None 0.74 58.0 3.24e-01 89.6% 8.4%
3412052 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.73 58.0 5.48e-01 89.6% 73.3%
3876105 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.73 62.0 4.92e-01 93.8% 47.4%
3531085 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.73 61.0 4.90e-01 93.8% 47.4%
3738248 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.73 56.0 4.88e-01 87.5% 54.7%
3231713 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.73 60.0 4.98e-01 95.8% 54.4%
3389539 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.73 58.0 5.91e-01 89.6% 95.6%
3389034 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.72 55.0 5.38e-01 87.5% 81.8%
3407580 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.72 60.0 5.35e-01 93.8% 75.7%
4599214 221.1.1.73 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RASSF8-10_RA 0.72 61.0 4.76e-01 95.8% 45.7%
3351227 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 55.0 3.31e-01 87.5% 14.6%
3482400 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.72 50.0 4.04e-01 75.0% 78.9%
3377897 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 54.0 3.09e-01 87.5% 9.2%
4478722 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.71 57.0 4.54e-01 93.8% 84.8%
3964707 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.71 61.0 3.97e-01 100.0% 72.2%
4268493 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.71 52.0 5.39e-01 87.5% 86.7%
4406660 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.71 60.0 3.89e-01 100.0% 37.9%
None 0.71 60.0 3.87e-01 100.0% 37.7%
None 0.71 54.0 3.03e-01 87.5% 8.4%
4340143 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.71 56.0 5.08e-01 91.7% 95.7%
3916476 221.1.1.73 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RASSF8-10_RA 0.70 59.0 4.87e-01 93.8% 52.9%
3395603 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.70 58.0 4.47e-01 93.8% 41.8%
1401773 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 53.0 3.31e-01 87.5% 17.2%
164929 221.1.1.74 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ASPP2-like_RA 0.69 55.0 4.57e-01 89.6% 50.0%
3535929 386.1.1.248 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 0.69 56.0 3.87e-01 93.8% 29.1%
5062217 4012.1.1.0 a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase 0.67 53.0 5.18e-01 91.7% 80.0%
3551383 2006.1.3.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C 0.66 54.0 3.44e-01 100.0% 34.1%
3390573 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.66 50.0 4.80e-01 89.6% 86.4%
3389045 379.1.1.1 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.66 49.0 4.87e-01 89.6% 80.0%
3970277 376.1.1.134 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › NosL 0.66 53.0 4.67e-01 93.8% 74.7%
3598323 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 51.0 4.27e-01 91.7% 50.0%
3988217 241.12.1.0 a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like 0.64 52.0 3.51e-01 93.8% 36.5%
4458441 2010.1.1.1 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.64 52.0 3.74e-01 95.8% 32.3%
3593119 3351.1.1.0 a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 0.64 50.0 3.75e-01 91.7% 34.6%
3966404 3019.1.1.1 beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN 0.59 47.0 3.61e-01 91.7% 81.7%
3969157 2010.1.1.1 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.57 44.0 3.20e-01 93.8% 31.2%
3198047 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 47.0 3.79e-01 97.9% 48.6%
4981878 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 43.0 3.88e-01 97.9% 62.9%
3744540 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 38.0 3.32e-01 89.6% 44.2%