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OX463805.1__CAI9187630.1__X__00113

Bact-Vir

OX463805.1__CAI9187630.1__X__00113

Identity

Accession:
OX463805 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Kochikohdavirus› Enterococcus_phage_Sw5

TaxID: 2950724

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-87
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.63 29.0 2.91e-01 92.9% 40.9%
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.55 39.0 3.22e-01 74.1% 57.2%
7ewsB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.52 39.0 2.91e-01 82.4% 38.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5037971 309.1.2.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.63 46.0 3.99e-01 75.3% 67.2%
3600932 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.62 48.0 3.41e-01 81.2% 66.1%
4036030 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.62 42.0 3.31e-01 81.2% 32.1%
1693526 2008.1.1.70 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_BsaWI 0.61 47.0 3.28e-01 100.0% 25.7%
4220408 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.59 41.0 3.20e-01 82.4% 32.1%
3487113 309.1.2.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.57 44.0 3.45e-01 83.5% 63.7%
4432169 309.1.2.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.55 41.0 3.40e-01 82.4% 71.5%
4076539 2005.1.1.5 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c 0.53 41.0 2.78e-01 81.2% 29.3%
5049257 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 42.0 2.82e-01 90.6% 93.2%
3559222 4193.1.1.1 ↗ alpha arrays › RUN domain › RUN domain › RUN domain › RUN 0.53 40.0 3.31e-01 83.5% 85.5%
5000894 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.52 42.0 2.80e-01 91.8% 90.1%
3766159 309.1.2.1 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD 0.52 46.0 3.57e-01 100.0% 67.2%
4987630 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 44.0 2.90e-01 100.0% 81.0%
3663076 865.1.1.1 ↗ beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.51 44.0 3.40e-01 100.0% 54.8%
4986011 301.2.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.50 43.0 2.96e-01 97.6% 69.4%