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OX463805.1__CAI9187689.1__X__00170

Bact-Vir

OX463805.1__CAI9187689.1__X__00170

Identity

Accession:
OX463805 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-81
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8c5yA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 49.0 3.85e-01 78.9% 64.7%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 45.0 4.00e-01 80.3% 47.4%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 33.0 4.18e-01 84.2% 94.6%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 44.0 3.98e-01 78.9% 51.0%
2xgjA05 2.40.30.300 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 58.0 4.81e-01 100.0% 73.8%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 45.0 4.03e-01 75.0% 79.2%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.49e-01 98.7% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.66e-01 98.7% 84.1%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 3.97e-01 84.2% 84.7%
1gkuB07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.60 47.0 4.34e-01 88.2% 78.4%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 39.0 3.71e-01 81.6% 57.1%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.58 44.0 4.51e-01 81.6% 94.6%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 44.0 3.84e-01 81.6% 78.4%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 40.0 3.27e-01 75.0% 100.0%
3ijlA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 39.0 3.55e-01 73.7% 57.4%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 47.0 3.75e-01 96.1% 64.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.56 39.0 4.38e-01 90.8% 100.0%
2chrA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 40.0 3.41e-01 76.3% 52.8%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.56 47.0 3.25e-01 98.7% 56.2%
3l1wA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 40.0 2.82e-01 77.6% 55.0%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 39.0 3.39e-01 76.3% 47.5%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 38.0 3.96e-01 78.9% 78.9%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.88e-01 77.6% 89.9%
3cfuA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.78e-01 100.0% 97.2%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.13e-01 94.7% 81.6%
1ufvA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.53 34.0 3.19e-01 88.2% 50.5%
3n4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 36.0 3.10e-01 77.6% 42.5%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.53 39.0 3.50e-01 77.6% 72.5%
2x3fA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.52 35.0 3.26e-01 88.2% 53.0%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.52 42.0 3.45e-01 88.2% 76.2%
2yfoA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.52 43.0 2.97e-01 96.1% 58.4%
1ye9A02 2.40.470.10 Mainly Beta › Beta Barrel › catalase hpii fold › catalase hpii domain 0.52 43.0 3.88e-01 94.7% 94.6%
8gjaD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.00e-01 94.7% 83.7%
1bf5A02 2.60.40.630 Mainly Beta › Sandwich › Immunoglobulin-like › STAT transcription factor, DNA-binding domain 0.51 40.0 3.32e-01 86.8% 77.6%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.51 36.0 3.05e-01 76.3% 78.4%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.50 43.0 3.36e-01 98.7% 81.7%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.50 44.0 3.77e-01 100.0% 75.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 33.0 3.59e-01 97.4% 85.5%
4gafB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.28e-01 77.6% 66.0%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 36.0 2.81e-01 78.9% 65.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041097 6043.1.1.0 a+b two layers › yfeY-like › yfeY-like › yfeY-like 0.71 47.0 5.31e-01 78.9% 92.7%
3218749 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.71 46.0 5.06e-01 71.1% 83.3%
3743261 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 47.0 4.05e-01 80.3% 44.2%
3838288 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 45.0 3.91e-01 80.3% 43.5%
3201714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.50e-01 96.1% 100.0%
4978172 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.69 47.0 4.35e-01 80.3% 55.8%
5066014 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 46.0 3.72e-01 80.3% 35.9%
5035149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 46.0 4.30e-01 80.3% 55.8%
3680043 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 50.0 4.35e-01 80.3% 65.8%
4023312 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.67 47.0 3.97e-01 73.7% 80.0%
3920375 102.1.1.124 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CABIT 0.67 60.0 4.80e-01 100.0% 63.5%
5081844 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 47.0 4.01e-01 80.3% 46.7%
3770801 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.66 60.0 5.56e-01 100.0% 84.2%
3273925 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.65 57.0 4.88e-01 100.0% 74.4%
3222710 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.64 46.0 4.57e-01 75.0% 76.9%
3939870 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.71e-01 100.0% 73.1%
3558388 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.62 44.0 4.70e-01 75.0% 93.8%
3412668 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 45.0 3.87e-01 76.3% 75.0%
4930094 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 43.0 3.90e-01 80.3% 52.4%
5028250 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.62 53.0 4.82e-01 96.1% 83.8%
3187511 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.62 55.0 4.58e-01 98.7% 74.6%
4013325 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.62 55.0 4.69e-01 100.0% 71.2%
3961706 4.1.1.161 beta barrels › SH3 › SH3 › SH3 › DUF4178 0.61 44.0 4.69e-01 96.1% 87.7%
3571716 2.1.1.188 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 0.61 48.0 4.57e-01 84.2% 97.8%
4275948 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.61 48.0 4.23e-01 88.2% 68.3%
1233328 4.1.1.116 beta barrels › SH3 › SH3 › SH3 › SH3_14 0.61 52.0 4.43e-01 98.7% 100.0%
3539840 2.1.1.188 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 0.61 46.0 4.49e-01 81.6% 97.6%
3714446 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.60 51.0 3.43e-01 96.1% 89.3%
4954093 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.60 46.0 3.94e-01 82.9% 81.6%
4981503 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 45.0 4.19e-01 80.3% 90.5%
2494924 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.60 43.0 4.32e-01 76.3% 74.4%
4969784 3425.2.1.0 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain 0.60 48.0 3.39e-01 92.1% 98.9%
3396462 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 43.0 4.55e-01 76.3% 96.9%
3911618 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 44.0 3.40e-01 80.3% 64.0%
4844428 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.59 43.0 4.34e-01 77.6% 86.7%
5020459 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 4.05e-01 80.3% 87.9%
3212073 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.58 52.0 4.14e-01 100.0% 64.5%
3510700 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 45.0 4.10e-01 84.2% 75.0%
3904569 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.57 43.0 3.67e-01 80.3% 72.8%
3736088 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 50.0 4.51e-01 100.0% 96.2%
5028249 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.57 49.0 4.31e-01 96.1% 86.8%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 4.05e-01 80.3% 76.0%
5057515 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.56 40.0 4.39e-01 98.7% 96.7%
3593482 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.56 41.0 3.81e-01 78.9% 100.0%
4994776 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.55 38.0 3.60e-01 72.4% 97.9%
4679671 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.55 46.0 4.03e-01 96.1% 61.0%
3243872 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 39.0 2.74e-01 76.3% 33.6%
3289254 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.54 45.0 4.26e-01 93.4% 74.7%
3716770 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.54 41.0 3.74e-01 81.6% 72.4%
4064637 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 3.40e-01 84.2% 71.0%
4943785 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 3.41e-01 84.2% 81.4%
4938033 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 34.0 3.10e-01 84.2% 45.9%
3183093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 47.0 3.86e-01 100.0% 54.3%
5013602 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.52 44.0 4.21e-01 98.7% 81.1%
5073695 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.52 44.0 4.08e-01 98.7% 73.0%
3897496 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 3.76e-01 78.9% 72.9%
5030959 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 41.0 4.09e-01 86.8% 91.3%
3693121 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.52 37.0 3.38e-01 77.6% 71.8%
3797447 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.51 42.0 3.93e-01 90.8% 83.2%
4313210 283.1.1.3 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.50 35.0 3.19e-01 89.5% 52.4%