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OY725572.1__CAJ1310986.1__AUSP0079_00007__00007

Bact-Vir

OY725572.1__CAJ1310986.1__AUSP0079_00007__00007

Identity

Accession:
OY725572 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-64
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.71 60.0 5.10e-01 100.0% 63.0%
1burS00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.70 59.0 4.86e-01 100.0% 65.0%
5mz2I00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.69 58.0 4.59e-01 100.0% 50.4%
1hkfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 58.0 4.87e-01 100.0% 71.3%
2ra1A05 2.60.40.2120 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 44.0 3.97e-01 100.0% 48.8%
3qdkB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 56.0 3.67e-01 100.0% 52.2%
2carB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.64 52.0 3.75e-01 93.4% 56.7%
1nbuA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.64 54.0 4.49e-01 100.0% 76.3%
3nqpA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 43.0 2.53e-01 70.5% 29.2%
3i8bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 52.0 3.43e-01 100.0% 56.6%
4uqfA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.61 51.0 4.11e-01 100.0% 63.4%
1a8rA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.61 51.0 4.09e-01 100.0% 61.8%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 50.0 3.40e-01 91.8% 84.5%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 52.0 3.50e-01 100.0% 91.7%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.60 52.0 3.95e-01 100.0% 49.3%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.60 47.0 2.97e-01 86.9% 27.6%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.59 44.0 3.03e-01 83.6% 58.2%
3f41A01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 43.0 2.87e-01 83.6% 39.9%
4c3xB02 3.90.700.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.58 51.0 3.88e-01 98.4% 98.6%
3wkmB01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 41.0 3.70e-01 100.0% 51.1%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 50.0 4.38e-01 100.0% 64.9%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.57 46.0 3.44e-01 95.1% 53.3%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.57 48.0 4.36e-01 100.0% 85.6%
5fvjA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 48.0 3.62e-01 100.0% 61.2%
2q7dA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 48.0 3.44e-01 100.0% 51.5%
1wgyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 48.0 4.50e-01 98.4% 98.7%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 49.0 3.94e-01 100.0% 74.8%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.34e-01 78.7% 57.4%
7wrnA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 46.0 3.30e-01 96.7% 52.0%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.55 42.0 3.18e-01 100.0% 36.5%
4npjB02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 44.0 3.56e-01 100.0% 64.8%
4q6lA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.54 46.0 3.64e-01 100.0% 65.9%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.34e-01 96.7% 81.7%
7pupA01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 41.0 2.92e-01 86.9% 89.3%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 42.0 3.13e-01 100.0% 33.1%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 46.0 3.63e-01 100.0% 55.7%
1w97L01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.52 40.0 3.13e-01 88.5% 99.4%
3dr6B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.28e-01 100.0% 79.9%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 44.0 3.71e-01 100.0% 73.9%
3vpbB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 43.0 3.68e-01 100.0% 75.0%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.52 40.0 2.89e-01 96.7% 69.3%
3mgdB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 45.0 3.37e-01 98.4% 80.3%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 43.0 3.43e-01 100.0% 85.0%
1c1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 42.0 3.99e-01 98.4% 92.2%
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 45.0 3.55e-01 100.0% 57.6%
5hv6A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 39.0 3.12e-01 83.6% 42.6%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.51 41.0 3.41e-01 98.4% 63.3%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 41.0 2.78e-01 98.4% 26.9%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 2.85e-01 73.8% 63.6%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 44.0 2.76e-01 98.4% 26.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4209651 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.79 41.0 3.27e-01 100.0% 27.0%
3337910 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.73 62.0 5.40e-01 100.0% 80.0%
4659490 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.71 60.0 5.03e-01 100.0% 59.1%
4883629 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.71 60.0 5.01e-01 100.0% 60.2%
1119296 223.1.1.3 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.71 50.0 4.53e-01 75.4% 63.9%
4277361 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.70 59.0 4.60e-01 100.0% 60.1%
4378815 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.69 58.0 5.16e-01 100.0% 69.5%
3705025 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.69 60.0 4.70e-01 100.0% 71.9%
3713468 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 53.0 3.73e-01 88.5% 48.4%
5016503 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.66 56.0 4.74e-01 100.0% 72.7%
3929847 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 53.0 4.84e-01 100.0% 67.5%
4880860 302.2.1.1 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small 0.65 49.0 4.92e-01 86.9% 85.9%
4978342 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 55.0 3.68e-01 98.4% 49.6%
4974741 304.125.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins 0.63 53.0 4.86e-01 100.0% 97.6%
4164014 7504.1.1.1 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like 0.62 50.0 3.58e-01 96.7% 63.4%
3709701 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 41.0 3.48e-01 70.5% 68.6%
3743295 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.60 44.0 4.02e-01 96.7% 57.6%
4998035 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 36.0 3.87e-01 100.0% 72.0%
5058176 206.1.3.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N 0.60 45.0 3.00e-01 85.2% 60.2%
5051860 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.60 42.0 3.80e-01 100.0% 52.2%
3251163 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.59 43.0 3.85e-01 100.0% 53.3%
3232211 11.2.1.58 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.59 51.0 3.59e-01 100.0% 43.3%
3877019 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 35.0 3.20e-01 100.0% 43.8%
3433727 1.1.1.10 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N 0.59 49.0 3.57e-01 100.0% 40.5%
3399617 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.59 42.0 3.79e-01 100.0% 53.3%
3797453 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 49.0 4.29e-01 100.0% 75.0%
3771985 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.58 43.0 3.87e-01 100.0% 55.6%
3390587 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 4.22e-01 98.4% 76.7%
3196591 11.1.1.871 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.58 49.0 3.68e-01 100.0% 70.6%
5028632 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.58 49.0 3.59e-01 100.0% 64.3%
4600905 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.57 40.0 3.74e-01 100.0% 57.5%
3577727 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 4.11e-01 100.0% 64.3%
5053967 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 47.0 4.35e-01 98.4% 92.9%
4397259 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.57 40.0 3.49e-01 100.0% 45.6%
5061559 5.1.4.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.57 44.0 2.78e-01 96.7% 15.5%
3939203 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.56 31.0 3.96e-01 86.9% 97.1%
4223344 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.48e-01 75.4% 95.8%
3192640 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.55 44.0 3.78e-01 100.0% 54.0%
3611538 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.55 40.0 4.19e-01 100.0% 85.5%
4957302 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 48.0 4.21e-01 98.4% 94.4%
4954707 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.53 39.0 3.43e-01 78.7% 60.0%
3936120 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.53 44.0 2.86e-01 98.4% 36.4%
3494653 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 36.0 2.66e-01 70.5% 50.3%
2482289 101.1.2.16 alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.52 39.0 3.17e-01 85.2% 67.4%
3787619 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.52 45.0 3.71e-01 100.0% 70.4%
3288873 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.51 41.0 2.64e-01 95.1% 95.1%
4212763 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.50 42.0 3.90e-01 100.0% 82.4%
3773104 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 42.0 3.22e-01 91.8% 63.7%