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OY978778.1__X__K60PH164C1_LOCUS15__00015

Bact-Vir

OY978778.1__X__K60PH164C1_LOCUS15__00015

Identity

Accession:
OY978778 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Kaypoctavirus› Klebsiella_phage_vB_Kpn_K60PH164C1

TaxID: 3071654

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-103
PDB
Domain cluster: rep: KM209274.1__AIM51725.1__HQ81_0199__00001__D14-76
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mu5A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.73 65.0 4.66e-01 100.0% 37.6%
3bo7A00 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.71 48.0 3.59e-01 70.4% 99.4%
7l6yA01 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.68 47.0 3.35e-01 71.8% 93.2%
1aj6A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.67 61.0 4.40e-01 100.0% 36.6%
1s14B00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.67 61.0 4.50e-01 100.0% 40.4%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.66 49.0 4.17e-01 78.9% 80.7%
3cwvA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 56.0 4.07e-01 100.0% 38.4%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.62 46.0 3.64e-01 77.5% 40.3%
3t8qB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 43.0 3.66e-01 71.8% 97.4%
3zh5A00 2.40.128.710 Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E 0.62 44.0 3.52e-01 73.2% 71.2%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 41.0 3.49e-01 76.1% 41.2%
4rlzA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.61 43.0 3.77e-01 76.1% 98.2%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 48.0 3.19e-01 88.7% 36.9%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.57 50.0 3.46e-01 100.0% 63.7%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 48.0 3.10e-01 100.0% 53.6%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.52e-01 98.6% 82.4%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.55 40.0 2.87e-01 77.5% 79.3%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.93e-01 100.0% 53.3%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 38.0 3.44e-01 76.1% 98.1%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 43.0 3.25e-01 87.3% 52.6%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.53 39.0 3.13e-01 78.9% 79.3%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.53 43.0 3.70e-01 88.7% 69.9%
3g3tA00 3.20.100.30 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain 0.52 43.0 2.95e-01 93.0% 82.1%
6qm7J00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 36.0 2.67e-01 71.8% 67.2%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.52 45.0 3.19e-01 100.0% 58.4%
5mqrA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 38.0 2.45e-01 81.7% 29.3%
5tdeA01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 40.0 3.20e-01 87.3% 61.1%
6qm7K00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 34.0 2.54e-01 70.4% 70.4%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 38.0 2.70e-01 83.1% 37.6%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 44.0 3.14e-01 95.8% 80.2%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4476436 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.73 66.0 4.57e-01 100.0% 34.3%
3421099 225.1.1.2 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HSP90,HATPase_c_3 0.71 63.0 4.25e-01 100.0% 28.7%
3308932 225.1.1.7 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.71 63.0 4.33e-01 100.0% 31.7%
3215987 225.1.1.7 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.69 61.0 4.15e-01 100.0% 52.7%
4945731 225.1.1.38 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DNA_gyraseB 0.67 60.0 4.17e-01 100.0% 31.3%
3223921 2484.1.1.259 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.66 45.0 4.14e-01 70.4% 83.3%
167860 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.63 56.0 4.06e-01 100.0% 38.2%
5043415 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 42.0 3.55e-01 70.4% 96.7%
4015084 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.62 53.0 4.12e-01 98.6% 64.8%
3763650 5.1.4.276 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd 0.62 53.0 3.46e-01 100.0% 73.1%
3940562 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.61 49.0 3.11e-01 85.9% 65.8%
4108962 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.61 47.0 2.97e-01 84.5% 32.0%
3452542 3407.1.1.0 ↗ mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.61 42.0 3.71e-01 71.8% 84.8%
5051960 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 44.0 3.40e-01 76.1% 71.0%
3598259 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.59 45.0 3.69e-01 83.1% 77.8%
3259927 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 50.0 3.29e-01 94.4% 72.7%
3424129 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.21e-01 100.0% 64.6%
None — 0.58 51.0 3.44e-01 97.2% 77.5%
3719333 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 3.11e-01 100.0% 81.9%
3512181 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 49.0 3.17e-01 91.5% 69.5%
3613685 227.1.1.17 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.57 45.0 3.59e-01 84.5% 75.7%
3719938 227.1.1.17 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.56 43.0 3.49e-01 83.1% 75.0%
3805925 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 47.0 3.09e-01 93.0% 69.8%
4056691 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 38.0 3.27e-01 70.4% 43.3%
3562570 306.10.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 0.56 40.0 3.27e-01 76.1% 99.3%
3400148 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 47.0 3.17e-01 100.0% 73.9%
3822596 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 46.0 3.02e-01 94.4% 68.7%
4407404 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.55 41.0 3.36e-01 78.9% 80.0%
3614085 11.2.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › YEATS 0.55 44.0 3.37e-01 93.0% 98.4%
3782836 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 2.98e-01 100.0% 44.3%
3801884 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 45.0 2.98e-01 94.4% 63.4%
3265841 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.54 37.0 3.33e-01 71.8% 69.0%
3744268 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.54 44.0 3.55e-01 88.7% 63.0%
3256903 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.53 43.0 3.48e-01 87.3% 74.1%
5028774 206.1.3.21 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.53 37.0 2.79e-01 73.2% 49.2%
4464763 5.1.4.17 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N 0.53 47.0 2.68e-01 100.0% 30.0%
3821103 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 44.0 3.01e-01 100.0% 50.2%
4511718 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.53 37.0 2.85e-01 73.2% 95.2%
4969382 1.1.7.149 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26500 0.53 37.0 3.37e-01 71.8% 71.6%
3696318 5.1.4.249 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.53 45.0 2.89e-01 100.0% 59.5%
3468658 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 3.01e-01 100.0% 57.7%
3263885 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.52 44.0 2.89e-01 100.0% 54.9%
3734423 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 2.88e-01 100.0% 50.9%
3618372 2484.1.1.99 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.52 39.0 3.35e-01 83.1% 84.2%
5056195 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.90e-01 100.0% 77.3%
4667155 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.52 38.0 3.18e-01 81.7% 96.4%
3760087 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.51 40.0 2.88e-01 84.5% 83.9%
3819875 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 42.0 2.84e-01 98.6% 61.5%
5050662 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.51 35.0 2.81e-01 73.2% 89.6%
3725804 868.1.1.4 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC 0.51 44.0 2.97e-01 98.6% 79.0%
3729951 4252.1.1.5 ↗ beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.51 35.0 2.73e-01 73.2% 91.2%
4351444 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.51 35.0 2.82e-01 73.2% 94.0%
3271738 2.1.1.137 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6748 0.50 41.0 3.56e-01 91.5% 94.8%
4182578 4252.1.1.5 ↗ beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.50 35.0 2.65e-01 73.2% 86.6%