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OY978784.1__X__K18PH07C1_LOCUS221__00221
Bact-VirOY978784.1__X__K18PH07C1_LOCUS221__00221
Identity
- Accession:
- OY978784 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
TaxID: 3071632
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12627.13 best | PolyA_pol_RNAbd | 27.3 | 3.40e-06 | 71.2% | 62.5% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h38A02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.90 | 85.0 | 5.42e-01 | 100.0% | 25.3% |
| 3h37A02 | 1.10.110.30 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › | 0.90 | 84.0 | 7.59e-01 | 100.0% | 77.9% |
| 4wbyA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.89 | 83.0 | 5.47e-01 | 100.0% | 28.4% |
| 1sqmA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.62 | 48.0 | 3.80e-01 | 100.0% | 38.3% |
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.58 | 50.0 | 3.90e-01 | 100.0% | 73.9% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 46.0 | 4.14e-01 | 100.0% | 65.3% |
| 8fefH01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.06e-01 | 97.0% | 31.3% |
| 3bhwA00 | 1.10.3540.10 | Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain | 0.54 | 46.0 | 3.44e-01 | 100.0% | 58.2% |
| 1x9bA00 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.53 | 33.0 | 3.56e-01 | 100.0% | 77.4% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 38.0 | 3.12e-01 | 83.3% | 51.7% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.08e-01 | 97.0% | 38.1% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 38.0 | 3.79e-01 | 83.3% | 76.1% |
| 6tkyA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.51 | 43.0 | 3.59e-01 | 97.0% | 97.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1234170 | 131.2.1.3 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd | 0.90 | 84.0 | 5.40e-01 | 100.0% | 25.1% |
| 2387767 | 131.2.1.0 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like | 0.88 | 82.0 | 5.41e-01 | 100.0% | 27.9% |
| 3922074 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.58 | 35.0 | 3.20e-01 | 100.0% | 42.1% |
| 4369965 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 36.0 | 3.46e-01 | 83.3% | 56.0% |
| 4958702 | 604.17.1.1 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C | 0.56 | 40.0 | 4.38e-01 | 92.4% | 100.0% |
| 3433700 | 639.1.1.2 ↗ | alpha arrays › HHA-like › Hemolysin expression modulating protein HHA › Hemolysin expression modulating protein HHA › Ovate | 0.56 | 41.0 | 4.32e-01 | 80.3% | 90.0% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.54 | 41.0 | 4.13e-01 | 87.9% | 81.5% |
| 3208683 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 37.0 | 4.17e-01 | 78.8% | 98.0% |
| 3509224 | 109.4.1.59 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF383,DUF384 | 0.51 | 41.0 | 2.77e-01 | 100.0% | 23.6% |
| 4948692 | 206.1.3.120 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › LysX_preATP_grasp | 0.51 | 39.0 | 2.60e-01 | 92.4% | 47.8% |
| 3822956 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.51 | 35.0 | 3.56e-01 | 89.4% | 75.4% |