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OY978799.1__CAK6596587.1__K52PH129C1_LOCUS24__00024

Bact-Vir

OY978799.1__CAK6596587.1__K52PH129C1_LOCUS24__00024

Identity

Accession:
OY978799 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Webervirus› Klebsiella_phage_vB_Kpn_K52PH129C1

TaxID: 3071652

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-124
PDB
Domain cluster: rep: NC_070830.1__YP_010655635.1__PP631_gp029__00029__D20-98
D2 high residues 133-217
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 42.0 3.65e-01 74.1% 100.0%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.58 49.0 4.27e-01 100.0% 95.1%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.57 42.0 3.81e-01 85.9% 58.6%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 44.0 3.26e-01 88.2% 89.2%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.55 47.0 4.11e-01 100.0% 82.6%
3p06A00 3.30.230.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.55 38.0 2.98e-01 72.9% 57.2%
4kq7A01 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.54 46.0 3.86e-01 100.0% 88.9%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 45.0 4.09e-01 95.3% 84.4%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 3.77e-01 100.0% 67.3%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 35.0 3.70e-01 84.7% 73.4%
1kkeA02 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.53 45.0 3.93e-01 100.0% 78.0%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 35.0 3.62e-01 81.2% 71.1%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 4.14e-01 94.1% 84.2%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 41.0 3.11e-01 85.9% 55.9%
2oyzA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 39.0 3.83e-01 100.0% 73.4%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 3.59e-01 74.1% 73.2%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 32.0 3.01e-01 92.9% 48.6%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 38.0 3.58e-01 100.0% 65.1%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.51 41.0 3.86e-01 95.3% 100.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3940850 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 40.0 4.24e-01 83.5% 85.3%
3500407 11.2.1.57 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF28126 0.55 42.0 3.20e-01 83.5% 82.5%
1146571 5092.1.1.8 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › TAdV_Fibre-like_head 0.55 47.0 4.11e-01 100.0% 82.6%
3974066 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.54 32.0 2.71e-01 100.0% 32.7%
3609894 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 37.0 2.98e-01 70.6% 75.7%
314850 5092.1.1.2 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Reo_sigma1 0.53 45.0 3.80e-01 100.0% 68.1%
4085589 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 36.0 3.74e-01 89.4% 75.0%
1851176 5092.1.1.0 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.52 44.0 3.86e-01 97.6% 82.4%
297731 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.52 41.0 3.09e-01 85.9% 54.9%
3253620 11.1.1.801 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.52 44.0 3.86e-01 100.0% 68.9%
3783834 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 37.0 2.77e-01 80.0% 55.7%
3980387 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 32.0 2.69e-01 100.0% 32.1%
2144351 109.4.1.1136 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N 0.51 40.0 3.42e-01 100.0% 50.3%
3668360 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.50 37.0 3.28e-01 90.6% 50.4%
169161 10.12.1.35 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ppnp 0.50 38.0 3.55e-01 100.0% 65.1%