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OY978817.1__CAK6597343.1__K2ALPHA62_LOCUS54__00054
Bact-VirOY978817.1__CAK6597343.1__K2ALPHA62_LOCUS54__00054
Identity
- Accession:
- OY978817 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Webervirus›
Klebsiella_phage_vB_Kpn_K2alpha62
TaxID: 3071680
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-58
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17438.9 best | DUF5417 | 73.7 | 1.60e-20 | 96.5% | 58.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ft8C01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 42.0 | 4.32e-01 | 98.2% | 74.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 48.0 | 3.46e-01 | 94.7% | 67.7% |
| 5teqA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.53 | 37.0 | 2.53e-01 | 78.9% | 19.4% |
| 5h4eA01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.50 | 41.0 | 2.86e-01 | 100.0% | 49.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3428671 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 44.0 | 4.19e-01 | 98.2% | 60.0% |
| 3683394 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 47.0 | 4.43e-01 | 98.2% | 67.1% |
| 3179973 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 46.0 | 4.32e-01 | 98.2% | 71.4% |
| 4255188 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.58 | 43.0 | 3.70e-01 | 100.0% | 50.0% |
| 4941594 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.57 | 48.0 | 3.34e-01 | 98.2% | 70.2% |
| 4026919 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.57 | 39.0 | 3.30e-01 | 100.0% | 39.1% |
| 3827561 | 304.8.1.106 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Saccharop_dh_N | 0.55 | 49.0 | 4.09e-01 | 100.0% | 62.0% |
| 4661496 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.55 | 39.0 | 2.26e-01 | 75.4% | 15.3% |
| 3711355 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 43.0 | 4.39e-01 | 100.0% | 94.5% |
| 5070663 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 47.0 | 3.58e-01 | 100.0% | 78.6% |
| 3710833 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 39.0 | 2.79e-01 | 80.7% | 34.1% |
| 3632428 | 211.1.1.24 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N | 0.52 | 38.0 | 3.03e-01 | 82.5% | 91.9% |