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OY978817.1__CAK6597652.1__K2ALPHA62_LOCUS72__00072

Bact-Vir

OY978817.1__CAK6597652.1__K2ALPHA62_LOCUS72__00072

Identity

Accession:
OY978817 ↗
Kingdom:
phage

Quality

64.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Webervirus› Klebsiella_phage_vB_Kpn_K2alpha62

TaxID: 3071680

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-93
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 53.0 3.47e-01 88.1% 35.7%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.43e-01 100.0% 98.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 5.07e-01 98.5% 88.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.55e-01 95.5% 72.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 5.27e-01 100.0% 89.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.62e-01 98.5% 75.8%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.81e-01 100.0% 75.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 5.28e-01 100.0% 98.3%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 46.0 4.81e-01 91.0% 85.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 5.18e-01 97.0% 91.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.58e-01 94.0% 83.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 4.96e-01 100.0% 84.3%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 40.0 4.31e-01 86.6% 78.6%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 41.0 4.18e-01 89.6% 70.1%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 38.0 3.73e-01 77.6% 56.2%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 48.0 2.90e-01 88.1% 47.6%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.03e-01 100.0% 70.3%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.72e-01 86.6% 90.5%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 4.34e-01 91.0% 78.8%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.59 45.0 3.76e-01 85.1% 91.1%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 42.0 4.10e-01 79.1% 69.9%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.26e-01 98.5% 76.1%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.37e-01 100.0% 68.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 34.0 3.90e-01 92.5% 81.6%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 4.55e-01 88.1% 90.8%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 39.0 4.05e-01 88.1% 78.1%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 39.0 3.95e-01 88.1% 74.6%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 44.0 2.85e-01 86.6% 28.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 39.0 3.98e-01 88.1% 75.8%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 44.0 2.87e-01 86.6% 29.1%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 48.0 4.06e-01 100.0% 74.6%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 44.0 4.49e-01 100.0% 95.3%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 38.0 3.57e-01 100.0% 56.0%
2k0mA00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.81e-01 94.0% 57.7%
3bqxA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 41.0 3.31e-01 83.6% 79.1%
2i7rA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 39.0 3.31e-01 76.1% 80.7%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 34.0 3.63e-01 79.1% 71.4%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 40.0 4.09e-01 85.1% 83.6%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 37.0 2.35e-01 73.1% 65.2%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 41.0 3.33e-01 88.1% 99.3%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.95e-01 89.6% 94.9%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.76e-01 94.0% 96.7%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 3.94e-01 89.6% 82.1%
4i93A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.26e-01 73.1% 88.4%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.52 41.0 3.50e-01 91.0% 81.4%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.52 38.0 2.88e-01 80.6% 37.9%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.75e-01 100.0% 89.7%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.51 35.0 2.65e-01 73.1% 90.1%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.51 39.0 3.70e-01 86.6% 74.1%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3213122 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.72 52.0 4.48e-01 100.0% 48.6%
4117297 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.08e-01 100.0% 75.7%
4966163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 4.68e-01 97.0% 66.7%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 5.24e-01 95.5% 84.6%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 4.96e-01 97.0% 75.7%
3967584 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.67 50.0 4.78e-01 82.1% 100.0%
3687350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.89e-01 95.5% 89.1%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.65 48.0 4.65e-01 95.5% 70.7%
3396897 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 49.0 5.03e-01 100.0% 92.1%
4680114 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.94e-01 100.0% 80.0%
3214162 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 47.0 4.94e-01 80.6% 88.3%
3646319 6.1.1.25 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF569 0.63 53.0 4.07e-01 100.0% 83.4%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.92e-01 100.0% 84.3%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 4.82e-01 100.0% 78.7%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 4.81e-01 100.0% 78.7%
4605602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.73e-01 100.0% 83.1%
3725260 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 48.0 4.78e-01 97.0% 81.4%
145285 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.62 45.0 4.54e-01 97.0% 77.3%
3915732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 48.0 4.50e-01 100.0% 69.4%
3391098 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.61 52.0 4.06e-01 100.0% 94.4%
1821014 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.61 49.0 4.97e-01 100.0% 95.3%
3546309 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 47.0 4.62e-01 100.0% 78.7%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 46.0 4.83e-01 100.0% 96.7%
2464247 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.60 44.0 4.48e-01 80.6% 90.9%
3552831 1.1.7.41 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.59 43.0 3.79e-01 100.0% 50.5%
3880325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 44.0 4.35e-01 97.0% 78.6%
3406663 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 41.0 4.44e-01 86.6% 100.0%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.58 48.0 4.87e-01 98.5% 93.8%
4110072 375.1.4.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.58 43.0 4.61e-01 95.5% 98.2%
3717566 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.58 44.0 3.08e-01 88.1% 76.8%
3953251 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 49.0 3.84e-01 95.5% 89.7%
3548416 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.57 48.0 4.11e-01 100.0% 84.2%
3402045 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.57 48.0 4.25e-01 100.0% 85.7%
4004760 64.1.1.5 ↗ beta meanders › WW domain-like › WW domain › WW domain › DUF333 0.56 35.0 3.91e-01 89.6% 91.1%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.56 46.0 3.42e-01 98.5% 34.4%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.56 39.0 3.91e-01 88.1% 73.5%
3272228 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 3.03e-01 92.5% 26.7%
3995669 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 36.0 2.49e-01 80.6% 17.7%
3899072 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.55 39.0 3.95e-01 91.0% 74.3%
3477683 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 42.0 2.78e-01 86.6% 31.9%
3177333 59.1.2.0 ↗ beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C 0.55 42.0 4.25e-01 88.1% 97.1%
3346946 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.54 44.0 3.79e-01 94.0% 54.9%
3648015 9.1.1.21 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind 0.54 45.0 3.50e-01 100.0% 85.3%
3222570 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.89e-01 100.0% 76.5%
396031 4.22.1.1 ↗ beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom 0.53 37.0 3.37e-01 100.0% 50.5%
4929323 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 44.0 3.87e-01 100.0% 83.6%
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 45.0 4.16e-01 100.0% 75.6%
3432156 386.1.1.117 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.53 32.0 3.45e-01 89.6% 72.7%
3471746 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.52 43.0 3.41e-01 98.5% 87.1%
4456732 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 41.0 3.90e-01 94.0% 71.2%
4818765 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 37.0 3.83e-01 74.6% 91.7%
3300738 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.52 45.0 3.52e-01 100.0% 66.0%
3634325 5.1.4.244 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.52 40.0 2.64e-01 86.6% 27.6%
3685243 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 43.0 2.94e-01 95.5% 55.9%
3533688 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 38.0 3.74e-01 82.1% 81.3%
3781077 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.52 35.0 3.17e-01 73.1% 48.5%
3954708 4325.1.1.9 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF26003 0.51 33.0 3.68e-01 98.5% 86.0%
3957726 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.51 37.0 2.85e-01 79.1% 55.0%
5082853 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.51 42.0 3.43e-01 92.5% 89.2%
3785876 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.51 42.0 2.67e-01 94.0% 93.8%
3611989 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 44.0 3.47e-01 100.0% 66.0%
4013660 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 41.0 2.59e-01 92.5% 24.0%
3204996 5.1.3.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.50 37.0 2.39e-01 85.1% 35.5%
4119875 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 38.0 3.89e-01 95.5% 86.2%