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OY978848.1__CAK6597271.1__K21LAMBDA1_LOCUS42__00042

Bact-Vir

OY978848.1__CAK6597271.1__K21LAMBDA1_LOCUS42__00042

Identity

Accession:
OY978848 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_vB_Kpn_K21lambda1

TaxID: 3071660

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-102
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nsaA00 1.10.3120.10 Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain 0.64 40.0 3.31e-01 100.0% 34.1%
1hy0A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.62 46.0 4.03e-01 78.7% 73.0%
2nscA01 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.62 41.0 4.31e-01 100.0% 76.9%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.58 37.0 3.74e-01 71.9% 63.3%
4pf6A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.57 42.0 2.84e-01 76.4% 78.7%
3m6jA01 1.20.1260.40 Mainly Alpha › Up-down Bundle › Ferritin › 0.56 42.0 3.84e-01 78.7% 92.3%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 39.0 4.09e-01 75.3% 97.5%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 39.0 3.71e-01 78.7% 68.6%
2ggzA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 41.0 3.53e-01 94.4% 82.4%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 3.40e-01 75.3% 67.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407816 3832.1.1.1 ↗ alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.64 44.0 3.62e-01 70.8% 72.4%
3475297 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 51.0 4.83e-01 91.0% 89.5%
3521510 192.7.1.73 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › PF31020 0.61 50.0 4.72e-01 91.0% 96.4%
3686670 103.1.1.3 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.60 38.0 3.92e-01 85.4% 67.1%
3750409 186.1.1.24 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › PF31020 0.59 46.0 4.41e-01 85.4% 100.0%
3581048 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.57 43.0 3.63e-01 80.9% 73.5%
4486248 3586.1.1.0 ↗ alpha arrays › Protelomerase stirrup domain › Protelomerase stirrup domain › Protelomerase stirrup domain 0.57 41.0 4.45e-01 76.4% 98.7%
3748471 4953.1.1.33 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › PF31020 0.56 44.0 4.09e-01 88.8% 99.2%
3476002 524.1.1.0 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.55 38.0 3.15e-01 73.0% 64.7%
3471570 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 43.0 3.35e-01 92.1% 92.2%
4306542 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.54 39.0 3.51e-01 77.5% 66.9%
4998970 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.53 40.0 3.34e-01 82.0% 74.7%
4597667 135.1.1.1 ↗ alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha 0.52 38.0 3.40e-01 80.9% 51.9%
None — 0.52 45.0 2.98e-01 100.0% 23.3%
3592838 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.51 43.0 3.06e-01 98.9% 81.5%
3593861 1075.4.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.51 41.0 2.37e-01 91.0% 21.3%
2970332 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.51 36.0 3.20e-01 76.4% 70.6%
3558030 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.50 40.0 2.95e-01 92.1% 69.8%
5012037 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 41.0 4.09e-01 88.8% 91.1%
3994602 171.1.1.1 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.50 43.0 4.11e-01 98.9% 97.1%
3443462 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.50 36.0 3.35e-01 76.4% 87.8%
3258401 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.50 41.0 3.40e-01 92.1% 78.2%