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OY978873.1__CAK6597534.1__K5LAMBDA5_LOCUS38__00038
Bact-VirOY978873.1__CAK6597534.1__K5LAMBDA5_LOCUS38__00038
Identity
- Accession:
- OY978873 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Taipeivirus›
Klebsiella_phage_vB_Ko_K5lambda5
TaxID: 3071641
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-72
Domain cluster:
rep: NC_069148.1__YP_010582275.1__PF620_gp42__00042__D29-88
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x65A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.64 | 56.0 | 3.61e-01 | 100.0% | 33.5% |
| 2cu2A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 52.0 | 3.42e-01 | 100.0% | 32.2% |
| 4nohA02 | 2.40.40.60 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 46.0 | 4.13e-01 | 80.9% | 70.8% |
| 6hrbB01 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.60 | 36.0 | 3.14e-01 | 75.0% | 36.9% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.58 | 44.0 | 3.57e-01 | 83.8% | 71.7% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 43.0 | 3.45e-01 | 85.3% | 85.0% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 45.0 | 4.66e-01 | 92.6% | 98.5% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 4.18e-01 | 83.8% | 97.4% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 41.0 | 3.29e-01 | 79.4% | 46.5% |
| 2i87A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 41.0 | 4.11e-01 | 94.1% | 95.9% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 42.0 | 4.23e-01 | 94.1% | 95.6% |
| 5d8dD03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 41.0 | 4.15e-01 | 91.2% | 95.5% |
| 3k5iA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 41.0 | 4.07e-01 | 91.2% | 88.6% |
| 4dmzB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 35.0 | 2.87e-01 | 79.4% | 35.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700503 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 3.63e-01 | 89.7% | 37.6% |
| 4410402 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.60 | 43.0 | 3.80e-01 | 91.2% | 49.1% |
| 3611587 | 4342.1.1.0 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like | 0.58 | 39.0 | 2.82e-01 | 70.6% | 24.1% |
| 140040 | 4216.1.1.3 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › LFE_1968-like | 0.58 | 44.0 | 3.57e-01 | 83.8% | 71.7% |
| 5043905 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.58 | 45.0 | 3.22e-01 | 88.2% | 35.1% |
| 5041479 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.56 | 46.0 | 3.51e-01 | 100.0% | 54.7% |
| None | — | 0.53 | 43.0 | 3.32e-01 | 100.0% | 53.3% | |
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.53 | 41.0 | 4.02e-01 | 89.7% | 97.3% |
| 2665242 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.52 | 39.0 | 2.76e-01 | 86.8% | 86.1% |
| 3287687 | 633.23.1.7 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DUF5336 | 0.51 | 35.0 | 2.92e-01 | 70.6% | 77.6% |
| 3333066 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 42.0 | 2.55e-01 | 95.6% | 91.6% |
| 4269844 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 40.0 | 4.03e-01 | 91.2% | 97.1% |
| 4646775 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.51 | 34.0 | 3.35e-01 | 70.6% | 96.0% |
| 3241020 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.50 | 41.0 | 3.07e-01 | 98.5% | 47.1% |
| 1871398 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.50 | 41.0 | 3.72e-01 | 98.5% | 99.0% |