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OY978873.1__CAK6598177.1__K5LAMBDA5_LOCUS107__00107

Bact-Vir

OY978873.1__CAK6598177.1__K5LAMBDA5_LOCUS107__00107

Identity

Accession:
OY978873 ↗
Kingdom:
phage

Quality

71.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4n6mB00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 56.0 5.27e-01 86.2% 82.8%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 53.0 4.76e-01 79.8% 86.6%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.68 56.0 4.98e-01 89.4% 91.1%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.68 57.0 4.92e-01 90.4% 85.4%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 53.0 4.55e-01 85.1% 77.3%
4jf8A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.67 56.0 4.83e-01 89.4% 85.4%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 53.0 4.44e-01 85.1% 72.2%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 45.0 4.84e-01 84.0% 84.2%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 53.0 5.22e-01 87.2% 81.0%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.67 55.0 4.88e-01 90.4% 86.2%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 54.0 4.73e-01 87.2% 84.8%
2ch9A01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 53.0 5.04e-01 87.2% 84.1%
5o46A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 56.0 5.29e-01 91.5% 82.5%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 53.0 4.91e-01 86.2% 91.7%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 53.0 4.76e-01 87.2% 88.7%
5i97C00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.66 54.0 4.81e-01 89.4% 91.2%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 52.0 4.75e-01 86.2% 91.3%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.65 39.0 4.49e-01 86.2% 87.3%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.65 52.0 4.97e-01 86.2% 89.0%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.68e-01 87.2% 84.0%
1lo7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 44.0 3.88e-01 71.3% 78.6%
5dvyA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.64 53.0 4.81e-01 90.4% 83.3%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.63 47.0 4.20e-01 79.8% 68.6%
3w1eA02 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.63 50.0 4.15e-01 88.3% 68.9%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 4.64e-01 91.5% 87.2%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 51.0 4.71e-01 89.4% 90.1%
2iqiB00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.62 49.0 4.03e-01 85.1% 65.5%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 51.0 4.33e-01 91.5% 71.1%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 48.0 4.38e-01 86.2% 87.6%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 38.0 3.79e-01 70.2% 59.0%
4hrvA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.61 44.0 3.94e-01 77.7% 71.9%
2c2iA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 46.0 3.91e-01 81.9% 96.0%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.58 45.0 3.55e-01 83.0% 64.0%
4lzkA00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.57 44.0 3.75e-01 83.0% 94.3%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.57 44.0 3.63e-01 81.9% 45.8%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 45.0 3.78e-01 85.1% 94.8%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 46.0 3.63e-01 93.6% 72.8%
4ncbA01 3.30.530.60 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.55 42.0 3.66e-01 81.9% 79.5%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.55 42.0 3.99e-01 84.0% 87.3%
1xo8A00 2.60.40.1820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 44.0 3.76e-01 86.2% 76.2%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 42.0 3.39e-01 84.0% 97.4%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.55 33.0 3.87e-01 84.0% 98.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.54 43.0 3.19e-01 86.2% 99.2%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 43.0 3.79e-01 90.4% 91.2%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 39.0 3.45e-01 79.8% 75.2%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.81e-01 94.7% 86.4%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 41.0 2.74e-01 86.2% 89.1%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 43.0 3.35e-01 94.7% 68.0%
1t71A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 37.0 2.74e-01 77.7% 91.1%
1oj5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 39.0 3.79e-01 85.1% 81.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3509969 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.71 58.0 5.39e-01 87.2% 81.7%
4149046 243.3.1.60 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5385 0.70 54.0 5.57e-01 84.0% 84.4%
4565299 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.69 57.0 4.93e-01 89.4% 85.4%
2632036 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.68 54.0 4.76e-01 86.2% 86.2%
6409 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.67 53.0 4.44e-01 85.1% 72.2%
3385898 7503.1.1.1 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG 0.67 51.0 4.36e-01 81.9% 81.9%
1146680 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.67 55.0 4.79e-01 89.4% 86.1%
6391 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.67 53.0 4.92e-01 86.2% 92.6%
3284315 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.67 53.0 4.85e-01 86.2% 90.4%
3289451 243.1.1.63 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6841 0.67 53.0 4.70e-01 87.2% 84.3%
4892175 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.66 55.0 4.85e-01 90.4% 83.0%
4352488 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.66 55.0 4.73e-01 91.5% 86.6%
4886881 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 54.0 4.79e-01 90.4% 81.2%
3589048 243.1.1.7 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N 0.65 54.0 4.76e-01 91.5% 79.3%
3818687 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.65 53.0 4.54e-01 87.2% 74.5%
3672823 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.64 50.0 4.20e-01 83.0% 66.3%
4037272 243.1.1.90 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26525 0.64 54.0 4.85e-01 92.6% 88.5%
3320752 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.63 50.0 4.35e-01 86.2% 75.2%
3280323 243.1.1.7 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N 0.62 50.0 4.82e-01 86.2% 90.5%
4427435 7503.1.1.22 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF29199 0.62 51.0 4.47e-01 90.4% 79.3%
3727006 243.1.1.9 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.62 51.0 4.31e-01 91.5% 65.9%
3388283 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.60 49.0 4.15e-01 89.4% 77.4%
4385734 5.1.4.567 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Helveticin_J 0.59 48.0 3.25e-01 86.2% 52.9%
4941606 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.59 45.0 3.95e-01 80.9% 60.7%
3283095 4321.1.1.0 a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region 0.59 52.0 4.12e-01 100.0% 61.3%
2878158 243.1.1.8 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC 0.59 49.0 4.05e-01 91.5% 76.2%
3781686 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 41.0 2.76e-01 71.3% 31.2%
3229636 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.58 41.0 3.23e-01 73.4% 36.8%
3584211 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 45.0 3.99e-01 86.2% 86.9%
3238052 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.57 46.0 3.07e-01 87.2% 21.8%
3611540 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 41.0 2.68e-01 92.6% 16.6%
3371719 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 3.74e-01 81.9% 82.1%
119442 3102.1.1.1 beta sandwiches › hypothetical protein BT_3535 › hypothetical protein BT_3535 › hypothetical protein BT_3535 › BT_3535-like 0.56 39.0 3.10e-01 72.3% 47.9%
3614126 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.55 45.0 3.45e-01 86.2% 63.2%
3611338 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 45.0 4.14e-01 91.5% 96.8%
4560955 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.55 44.0 3.25e-01 85.1% 56.5%
3258054 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 42.0 3.68e-01 83.0% 65.5%
4255284 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.54 37.0 2.78e-01 70.2% 62.2%
5030898 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.54 42.0 3.87e-01 81.9% 69.2%
3718996 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 43.0 2.75e-01 87.2% 51.3%
3625247 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.54 36.0 3.50e-01 70.2% 69.1%
3770163 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 41.0 4.10e-01 83.0% 94.0%
3861759 11.1.1.640 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.53 41.0 4.09e-01 83.0% 93.0%
3399850 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.53 40.0 3.66e-01 80.9% 68.0%
3989865 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 39.0 2.97e-01 78.7% 93.0%
4031111 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.52 38.0 2.93e-01 77.7% 91.2%
3587070 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 44.0 3.79e-01 90.4% 67.6%
2549178 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.52 41.0 3.89e-01 87.2% 85.8%
7873 246.2.1.10 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › YmdB 0.51 37.0 2.74e-01 77.7% 91.1%
3608052 809.2.1.4 a+b two layers › BLIP-like › BT0923-like › BT0923-like › Herpes_UL52 0.51 43.0 4.25e-01 91.5% 99.0%
5058622 5.1.9.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component 0.50 43.0 3.14e-01 92.6% 63.6%
1900709 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 37.0 2.82e-01 78.7% 91.7%