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OY978873.1__CAK6598225.1__K5LAMBDA5_LOCUS114__00114

Bact-Vir

OY978873.1__CAK6598225.1__K5LAMBDA5_LOCUS114__00114

Identity

Accession:
OY978873 ↗
Kingdom:
phage

Quality

90.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Taipeivirus› Klebsiella_phage_vB_Ko_K5lambda5

TaxID: 3071641

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-224
PDB
Domain cluster: rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00154.28 best RecA_N 44.5 2.00e-11 97.4% 58.0%
D2 medium residues 275-352
PDB
Domain cluster: rep: FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00185__D106-178
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21134.3 best T4_UVSX_C 30.4 4.10e-07 75.6% 95.4%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.88 73.0 4.80e-01 85.9% 25.8%
1f7uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 37.0 2.52e-01 74.4% 26.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1308290 502.1.1.2 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › T4_UVSX_C 0.89 74.0 7.22e-01 87.2% 85.7%
3925231 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 42.0 4.56e-01 75.6% 86.7%
3931217 502.1.1.0 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain 0.64 43.0 4.60e-01 79.5% 84.6%