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OY979424.1__CAK6605730.1__K41P2_LOCUS53__00053
Bact-VirOY979424.1__CAK6605730.1__K41P2_LOCUS53__00053
Identity
- Accession:
- OY979424 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_vB_Ko_K41P2
TaxID: 3071626
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-46
D2
high
residues 58-142
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 51.0 | 3.77e-01 | 95.3% | 46.5% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.59 | 46.0 | 4.02e-01 | 94.1% | 55.4% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 42.0 | 3.79e-01 | 91.8% | 55.6% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.55 | 32.0 | 3.01e-01 | 100.0% | 44.1% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 33.0 | 3.25e-01 | 100.0% | 54.9% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 43.0 | 3.90e-01 | 91.8% | 62.2% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 46.0 | 3.94e-01 | 94.1% | 56.7% |
| 3bo7A00 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.54 | 47.0 | 3.86e-01 | 100.0% | 95.2% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 42.0 | 3.80e-01 | 94.1% | 61.3% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 45.0 | 3.24e-01 | 94.1% | 46.3% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 43.0 | 3.95e-01 | 94.1% | 66.4% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 44.0 | 3.19e-01 | 94.1% | 32.1% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.52 | 46.0 | 4.09e-01 | 100.0% | 87.1% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 43.0 | 3.84e-01 | 94.1% | 63.3% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 42.0 | 3.09e-01 | 94.1% | 31.4% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 43.0 | 3.87e-01 | 95.3% | 64.7% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 40.0 | 3.14e-01 | 91.8% | 37.8% |
| 2gkpA00 | 3.40.1590.10 | Alpha Beta › 3-Layer(aba) Sandwich › NMB0488-like fold › NMB0488-like | 0.51 | 37.0 | 2.97e-01 | 75.3% | 86.5% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 42.0 | 3.42e-01 | 94.1% | 45.9% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 41.0 | 3.79e-01 | 92.9% | 67.3% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 41.0 | 3.71e-01 | 92.9% | 63.4% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 42.0 | 3.07e-01 | 92.9% | 44.7% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 43.0 | 3.05e-01 | 94.1% | 32.0% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 43.0 | 3.40e-01 | 94.1% | 50.3% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 42.0 | 3.71e-01 | 94.1% | 63.3% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.60 | 33.0 | 3.08e-01 | 100.0% | 41.0% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.57 | 44.0 | 3.93e-01 | 94.1% | 56.8% |
| 3387590 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.57 | 43.0 | 3.95e-01 | 94.1% | 60.9% |
| 4606763 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.57 | 44.0 | 4.00e-01 | 94.1% | 60.0% |
| 4500973 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.56 | 44.0 | 3.97e-01 | 94.1% | 59.3% |
| 5039026 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.55 | 42.0 | 3.75e-01 | 94.1% | 57.5% |
| 2141304 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.55 | 47.0 | 4.05e-01 | 94.1% | 60.3% |
| 2492036 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.54 | 43.0 | 3.81e-01 | 94.1% | 58.1% |
| 1013950 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.54 | 46.0 | 4.06e-01 | 94.1% | 64.8% |
| 4591776 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.54 | 46.0 | 3.98e-01 | 94.1% | 62.3% |
| 2522057 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.53 | 43.0 | 3.84e-01 | 94.1% | 61.0% |
| 1102993 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.53 | 42.0 | 3.63e-01 | 94.1% | 52.8% |
| 3397928 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.53 | 45.0 | 3.98e-01 | 94.1% | 66.4% |
| 4860663 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.53 | 43.0 | 3.68e-01 | 94.1% | 54.3% |
| 2926754 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.53 | 45.0 | 3.95e-01 | 94.1% | 78.3% |
| 3256387 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.53 | 45.0 | 3.71e-01 | 94.1% | 66.5% |
| 4983064 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 42.0 | 3.78e-01 | 94.1% | 60.5% |
| 5043507 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 43.0 | 3.85e-01 | 94.1% | 63.3% |
| 4460376 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.53 | 43.0 | 3.89e-01 | 94.1% | 63.3% |
| 4038410 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.53 | 43.0 | 3.72e-01 | 91.8% | 90.7% |
| 4212381 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.52 | 44.0 | 3.84e-01 | 94.1% | 60.7% |
| 4876748 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.52 | 43.0 | 3.85e-01 | 94.1% | 62.9% |
| 4102438 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.52 | 43.0 | 3.86e-01 | 94.1% | 64.2% |
| 4948360 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.52 | 41.0 | 3.65e-01 | 94.1% | 58.1% |
| 4929645 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.52 | 41.0 | 3.68e-01 | 94.1% | 60.0% |
| 4059466 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.52 | 42.0 | 4.34e-01 | 94.1% | 97.4% |
| 3719143 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.52 | 42.0 | 3.61e-01 | 94.1% | 56.3% |
| 3015241 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.51 | 42.0 | 3.79e-01 | 92.9% | 64.7% |
| 3407531 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 42.0 | 3.67e-01 | 94.1% | 57.8% |
| 2492033 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.51 | 41.0 | 3.55e-01 | 92.9% | 54.3% |
| 3785352 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.51 | 43.0 | 3.51e-01 | 94.1% | 60.6% |
| 4608521 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.51 | 43.0 | 3.30e-01 | 94.1% | 52.0% |
| 3728061 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 43.0 | 3.73e-01 | 94.1% | 60.2% |
| 3387600 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.51 | 41.0 | 3.73e-01 | 94.1% | 63.3% |
| 3804177 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.51 | 43.0 | 3.62e-01 | 94.1% | 55.9% |
| 4024730 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.50 | 42.0 | 4.22e-01 | 92.9% | 98.8% |
| 2987540 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.50 | 41.0 | 3.64e-01 | 94.1% | 60.8% |