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OY979424.1__CAK6606041.1__K41P2_LOCUS65__00065

Bact-Vir

OY979424.1__CAK6606041.1__K41P2_LOCUS65__00065

Identity

Accession:
OY979424 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Slopekvirus› Klebsiella_phage_vB_Ko_K41P2

TaxID: 3071626

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-129
PDB
Domain cluster: rep: MG592441.1__AUR84739.1__NVP1063O_072__00072__D4-150
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7vA00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.66 37.0 4.24e-01 91.3% 75.6%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 53.0 4.88e-01 86.1% 89.8%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 51.0 4.69e-01 83.5% 86.3%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.64 39.0 4.11e-01 91.3% 66.0%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 50.0 4.49e-01 86.1% 87.3%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 4.68e-01 86.1% 91.5%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 48.0 4.27e-01 83.5% 80.4%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 46.0 3.93e-01 80.9% 67.0%
1wzlA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 33.0 3.77e-01 73.0% 73.5%
6xmtA02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.59 46.0 4.03e-01 81.7% 99.4%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.56 45.0 3.96e-01 85.2% 97.0%
2oyzA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 34.0 3.76e-01 73.0% 76.6%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.91e-01 77.4% 94.7%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 39.0 4.14e-01 100.0% 85.9%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.54 36.0 3.79e-01 81.7% 76.5%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.53 33.0 3.82e-01 74.8% 87.8%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 40.0 3.70e-01 83.5% 82.6%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 45.0 3.38e-01 100.0% 71.3%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 31.0 3.76e-01 70.4% 100.0%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 35.0 3.73e-01 92.2% 85.6%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 35.0 3.87e-01 83.5% 93.3%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038083 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.73 57.0 5.61e-01 87.8% 75.8%
3655033 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.69 51.0 4.81e-01 80.9% 65.7%
3970104 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.66 38.0 4.43e-01 91.3% 80.0%
3439826 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.65 55.0 5.00e-01 89.6% 70.0%
5079640 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.63 36.0 3.99e-01 95.7% 70.0%
3181792 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.62 49.0 4.15e-01 86.1% 81.5%
3167601 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.61 39.0 4.26e-01 74.8% 77.9%
3453150 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.61 48.0 4.00e-01 83.5% 86.2%
4091857 310.3.1.4 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.60 39.0 3.74e-01 100.0% 56.9%
4494197 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 45.0 4.65e-01 82.6% 84.5%
3208802 3435.1.1.3 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L 0.59 52.0 3.96e-01 97.4% 88.1%
5047307 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 33.0 3.73e-01 97.4% 73.5%
4937122 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.58 36.0 4.43e-01 75.7% 96.0%
None — 0.58 42.0 4.22e-01 84.3% 71.7%
4478425 213.1.1.14 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_16 0.58 47.0 3.95e-01 87.8% 92.0%
4928736 331.19.1.0 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.58 49.0 4.59e-01 97.4% 75.7%
3272801 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.58 45.0 3.20e-01 85.2% 33.9%
1949089 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.54 40.0 3.95e-01 78.3% 91.2%
3227816 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.53 42.0 3.30e-01 84.3% 47.8%
3655368 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 34.0 4.02e-01 73.0% 98.7%
5053192 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 40.0 3.87e-01 82.6% 97.8%
4093588 4194.1.1.2 ↗ a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › Trp_DMAT 0.52 45.0 3.10e-01 97.4% 63.2%
4996027 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.52 47.0 3.62e-01 100.0% 87.3%
3874376 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.52 40.0 3.32e-01 82.6% 78.4%
4875999 309.1.1.2 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C 0.52 46.0 3.45e-01 99.1% 64.4%
4257086 7579.1.1.14 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.51 43.0 3.38e-01 95.7% 70.9%
3408941 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.51 33.0 3.83e-01 74.8% 95.0%
2014 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.50 45.0 3.35e-01 100.0% 68.5%