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OY979424.1__CAK6606714.1__K41P2_LOCUS111__00111
Bact-VirOY979424.1__CAK6606714.1__K41P2_LOCUS111__00111
Identity
- Accession:
- OY979424 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_vB_Ko_K41P2
TaxID: 3071626
Cluster
View cluster (81 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09097.18 best | Phage-tail_1 | 115.1 | 4.80e-33 | 100.0% | 51.8% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.91 | 84.0 | 8.23e-01 | 100.0% | 90.6% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.79 | 59.0 | 4.84e-01 | 100.0% | 44.8% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.75 | 63.0 | 5.02e-01 | 98.0% | 46.2% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.75 | 60.0 | 5.01e-01 | 97.0% | 51.2% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 36.0 | 4.34e-01 | 82.8% | 69.7% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.70 | 51.0 | 5.05e-01 | 83.8% | 72.1% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.70 | 53.0 | 5.16e-01 | 99.0% | 73.4% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 62.0 | 6.02e-01 | 100.0% | 97.2% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 40.0 | 4.23e-01 | 74.7% | 64.4% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.66 | 46.0 | 4.25e-01 | 71.7% | 92.7% |
| 4ofkB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 4.15e-01 | 77.8% | 62.5% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 33.0 | 3.71e-01 | 90.9% | 64.6% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 46.0 | 4.50e-01 | 93.9% | 70.8% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 56.0 | 5.17e-01 | 100.0% | 81.1% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.63 | 55.0 | 4.83e-01 | 97.0% | 83.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 33.0 | 3.97e-01 | 98.0% | 79.4% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 38.0 | 3.95e-01 | 82.8% | 64.9% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.60 | 44.0 | 3.76e-01 | 77.8% | 81.0% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.10e-01 | 75.8% | 69.0% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 36.0 | 3.03e-01 | 100.0% | 35.5% |
| 1wubA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.58 | 43.0 | 3.58e-01 | 77.8% | 76.7% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 3.80e-01 | 92.9% | 59.0% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.06e-01 | 76.8% | 76.8% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 40.0 | 4.22e-01 | 99.0% | 86.2% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 41.0 | 4.22e-01 | 99.0% | 84.8% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.54 | 48.0 | 3.78e-01 | 100.0% | 81.4% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.79e-01 | 76.8% | 70.6% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 38.0 | 3.24e-01 | 100.0% | 47.7% |
| 6x1kA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 38.0 | 3.69e-01 | 75.8% | 86.1% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.53 | 45.0 | 4.27e-01 | 99.0% | 95.2% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 4.12e-01 | 98.0% | 84.4% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.51 | 40.0 | 3.11e-01 | 86.9% | 41.1% |
| 1jkgB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.48e-01 | 90.9% | 87.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.91 | 87.0 | 8.33e-01 | 100.0% | 92.8% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 62.0 | 6.60e-01 | 97.0% | 100.0% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.76 | 52.0 | 5.44e-01 | 79.8% | 76.7% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.76 | 59.0 | 5.51e-01 | 84.8% | 67.5% |
| 4062509 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.75 | 57.0 | 5.59e-01 | 83.8% | 75.2% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 65.0 | 6.69e-01 | 99.0% | 98.9% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 66.0 | 6.14e-01 | 98.0% | 95.2% |
| 3968432 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 57.0 | 5.58e-01 | 100.0% | 76.2% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.74 | 61.0 | 6.38e-01 | 99.0% | 97.8% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 62.0 | 6.46e-01 | 98.0% | 100.0% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 62.0 | 6.43e-01 | 98.0% | 100.0% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 63.0 | 6.45e-01 | 100.0% | 97.9% |
| 3290365 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.73 | 56.0 | 5.28e-01 | 96.0% | 67.5% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.72 | 58.0 | 5.18e-01 | 84.8% | 64.4% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 57.0 | 5.46e-01 | 99.0% | 73.0% |
| 3966494 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 55.0 | 5.33e-01 | 100.0% | 72.7% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.72 | 50.0 | 5.21e-01 | 80.8% | 78.9% |
| 4260084 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 56.0 | 5.28e-01 | 100.0% | 69.2% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 56.0 | 5.22e-01 | 83.8% | 76.8% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 59.0 | 5.42e-01 | 100.0% | 70.4% |
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 59.0 | 6.22e-01 | 99.0% | 100.0% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 48.0 | 4.97e-01 | 80.8% | 77.8% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 5.95e-01 | 91.9% | 97.0% |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 58.0 | 6.05e-01 | 94.9% | 98.9% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 57.0 | 5.17e-01 | 88.9% | 72.3% |
| 3730204 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 48.0 | 4.62e-01 | 75.8% | 67.0% |
| 3332690 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.67 | 47.0 | 4.76e-01 | 83.8% | 73.0% |
| 3907134 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.66 | 57.0 | 4.36e-01 | 100.0% | 41.8% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.66 | 47.0 | 4.66e-01 | 80.8% | 70.5% |
| 4943623 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 4.66e-01 | 77.8% | 74.0% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 54.0 | 4.97e-01 | 100.0% | 75.4% |
| 3972645 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.61 | 48.0 | 4.27e-01 | 97.0% | 60.7% |
| 4003057 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.19e-01 | 78.8% | 67.6% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 41.0 | 3.10e-01 | 71.7% | 54.1% |
| 3380536 | 4252.1.1.7 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl | 0.55 | 39.0 | 3.47e-01 | 75.8% | 76.0% |
| 5030147 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 38.0 | 3.37e-01 | 72.7% | 66.2% |
| 4646504 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.50 | 39.0 | 3.19e-01 | 92.9% | 42.5% |
| 4275176 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.50 | 38.0 | 2.99e-01 | 91.9% | 35.7% |
D2
high
residues 214-229_300-355
Domain cluster:
rep: EU863408.1__ACL78133.1__EpJSE_00184__00184__D66-119
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.87 | 79.0 | 7.07e-01 | 95.8% | 92.6% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.81 | 72.0 | 5.33e-01 | 95.8% | 48.3% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.78 | 70.0 | 5.87e-01 | 97.2% | 61.5% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.77 | 65.0 | 4.90e-01 | 93.1% | 44.0% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.75 | 66.0 | 4.86e-01 | 95.8% | 41.8% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.75 | 67.0 | 4.99e-01 | 97.2% | 66.9% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.74 | 66.0 | 5.09e-01 | 97.2% | 69.1% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 66.0 | 5.19e-01 | 100.0% | 75.8% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.73 | 65.0 | 4.92e-01 | 97.2% | 67.7% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.73 | 64.0 | 4.94e-01 | 97.2% | 68.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.72 | 63.0 | 5.27e-01 | 97.2% | 64.8% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.71 | 61.0 | 5.42e-01 | 97.2% | 75.2% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.70 | 62.0 | 5.10e-01 | 95.8% | 65.6% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 55.0 | 4.93e-01 | 90.3% | 62.5% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.67 | 52.0 | 4.39e-01 | 86.1% | 93.5% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.66 | 51.0 | 4.32e-01 | 84.7% | 92.7% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 50.0 | 4.37e-01 | 83.3% | 88.3% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.65 | 55.0 | 3.55e-01 | 91.7% | 43.9% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 45.0 | 4.43e-01 | 77.8% | 67.1% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 57.0 | 5.06e-01 | 100.0% | 90.5% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 52.0 | 5.06e-01 | 95.8% | 79.5% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 4.31e-01 | 83.3% | 77.1% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 46.0 | 4.23e-01 | 77.8% | 60.4% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 45.0 | 4.32e-01 | 79.2% | 66.7% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.62 | 43.0 | 3.59e-01 | 75.0% | 61.6% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.61 | 49.0 | 3.58e-01 | 88.9% | 93.1% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.74e-01 | 93.1% | 74.7% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.61 | 45.0 | 3.83e-01 | 77.8% | 58.9% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.61 | 44.0 | 3.55e-01 | 77.8% | 61.8% |
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.61 | 43.0 | 4.07e-01 | 76.4% | 96.7% |
| 5heeA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.60 | 48.0 | 3.29e-01 | 88.9% | 97.7% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.59 | 45.0 | 4.29e-01 | 91.7% | 68.6% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 46.0 | 3.93e-01 | 84.7% | 90.8% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 3.83e-01 | 79.2% | 72.0% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.28e-01 | 91.7% | 72.2% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 52.0 | 4.09e-01 | 100.0% | 53.3% |
| 3wraA01 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.58 | 48.0 | 3.18e-01 | 91.7% | 89.1% |
| 1jsxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.42e-01 | 93.1% | 32.6% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.58 | 50.0 | 4.42e-01 | 97.2% | 90.6% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.57 | 50.0 | 4.10e-01 | 100.0% | 54.7% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 42.0 | 3.97e-01 | 76.4% | 65.5% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 46.0 | 3.81e-01 | 90.3% | 64.9% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 43.0 | 3.78e-01 | 83.3% | 86.7% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.22e-01 | 91.7% | 81.0% |
| 2l8kA00 | 3.30.1330.220 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha | 0.56 | 48.0 | 4.06e-01 | 95.8% | 77.2% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 50.0 | 4.71e-01 | 100.0% | 88.4% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 45.0 | 4.25e-01 | 87.5% | 76.7% |
| 3d85D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.33e-01 | 98.6% | 76.4% |
| 3merA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.37e-01 | 86.1% | 96.5% |
| 3on9A00 | 2.60.240.20 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › | 0.56 | 41.0 | 3.24e-01 | 80.6% | 48.1% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 3.55e-01 | 93.1% | 40.0% |
| 3tm4A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 3.49e-01 | 100.0% | 37.7% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 4.52e-01 | 91.7% | 91.8% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 4.07e-01 | 87.5% | 96.8% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.28e-01 | 100.0% | 76.0% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 44.0 | 4.01e-01 | 88.9% | 74.2% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 3.27e-01 | 77.8% | 82.1% |
| 2m83A00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.55 | 47.0 | 3.90e-01 | 100.0% | 58.3% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 49.0 | 4.85e-01 | 100.0% | 98.7% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 45.0 | 3.96e-01 | 93.1% | 63.6% |
| 3tmaA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.41e-01 | 98.6% | 37.3% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 45.0 | 4.29e-01 | 93.1% | 83.5% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 43.0 | 4.07e-01 | 91.7% | 81.5% |
| 1ciaA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 39.0 | 2.88e-01 | 79.2% | 77.9% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 44.0 | 2.78e-01 | 93.1% | 36.5% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 41.0 | 3.74e-01 | 84.7% | 64.0% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 38.0 | 3.13e-01 | 79.2% | 74.7% |
| 7qu8A01 | 2.60.220.50 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.53 | 46.0 | 3.27e-01 | 95.8% | 95.2% |
| 6v55A03 | 2.60.220.50 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.52 | 44.0 | 3.37e-01 | 93.1% | 95.8% |
| 4j37A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.52 | 44.0 | 3.35e-01 | 100.0% | 72.1% |
| 2x1wL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 45.0 | 3.99e-01 | 100.0% | 76.2% |
| 3ostA00 | 3.30.310.220 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain | 0.51 | 36.0 | 3.18e-01 | 77.8% | 71.4% |
| 6hhnA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.36e-01 | 75.0% | 65.2% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.49e-01 | 91.7% | 71.3% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 38.0 | 3.58e-01 | 81.9% | 70.0% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.29e-01 | 76.4% | 64.9% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 77.0 | 7.20e-01 | 94.4% | 92.9% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 73.0 | 6.51e-01 | 94.4% | 81.0% |
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 72.0 | 7.11e-01 | 91.7% | 92.0% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 74.0 | 6.93e-01 | 95.8% | 84.7% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 71.0 | 6.35e-01 | 97.2% | 85.0% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.80 | 71.0 | 5.78e-01 | 95.8% | 64.0% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.79 | 69.0 | 5.95e-01 | 95.8% | 95.5% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.79 | 70.0 | 6.40e-01 | 95.8% | 83.7% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.78 | 69.0 | 6.36e-01 | 95.8% | 87.8% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.78 | 64.0 | 6.01e-01 | 95.8% | 74.1% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.78 | 68.0 | 5.95e-01 | 95.8% | 99.0% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 67.0 | 6.33e-01 | 95.8% | 90.6% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 61.0 | 6.38e-01 | 86.1% | 100.0% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 63.0 | 5.75e-01 | 98.6% | 69.5% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.75 | 64.0 | 5.34e-01 | 94.4% | 85.5% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.75 | 66.0 | 5.58e-01 | 98.6% | 65.0% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.74 | 65.0 | 6.00e-01 | 94.4% | 96.7% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.72 | 64.0 | 5.50e-01 | 97.2% | 71.8% |
| 3289340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 60.0 | 5.82e-01 | 93.1% | 82.5% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.71 | 60.0 | 5.80e-01 | 93.1% | 86.4% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.71 | 60.0 | 5.59e-01 | 94.4% | 78.9% |
| 4024673 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.71 | 51.0 | 4.42e-01 | 76.4% | 100.0% |
| 2877144 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.70 | 61.0 | 4.00e-01 | 95.8% | 27.5% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 58.0 | 5.41e-01 | 97.2% | 73.7% |
| 3597995 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 52.0 | 4.50e-01 | 80.6% | 53.6% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 60.0 | 5.49e-01 | 97.2% | 73.7% |
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 50.0 | 5.10e-01 | 77.8% | 85.7% |
| 4638008 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.68 | 50.0 | 4.26e-01 | 79.2% | 96.7% |
| 3734783 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.68 | 52.0 | 3.22e-01 | 80.6% | 55.9% |
| 4217713 | 327.21.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › SpoIIE regulatory domain › SpoIIE regulatory domain › PF31108 | 0.67 | 57.0 | 5.44e-01 | 94.4% | 82.4% |
| 4172447 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 54.0 | 5.36e-01 | 100.0% | 86.7% |
| 4966530 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 50.0 | 5.10e-01 | 80.6% | 84.3% |
| 4649925 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.65 | 49.0 | 3.56e-01 | 81.9% | 35.6% |
| 4190012 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.63 | 49.0 | 3.46e-01 | 84.7% | 32.9% |
| 3952346 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 45.0 | 3.65e-01 | 77.8% | 38.6% |
| 3277088 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 5.03e-01 | 90.3% | 100.0% |
| 3821170 | 319.1.1.15 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF27746 | 0.62 | 52.0 | 4.49e-01 | 91.7% | 83.6% |
| 4266150 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.62 | 48.0 | 3.34e-01 | 86.1% | 54.1% |
| 4193142 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.62 | 48.0 | 3.31e-01 | 86.1% | 51.5% |
| 4158236 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.62 | 49.0 | 3.39e-01 | 88.9% | 51.5% |
| 4475204 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.61 | 49.0 | 3.40e-01 | 88.9% | 56.2% |
| 4672169 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.61 | 49.0 | 3.42e-01 | 88.9% | 55.9% |
| 4258556 | 11.1.1.66 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG | 0.61 | 52.0 | 4.65e-01 | 93.1% | 71.0% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.70e-01 | 98.6% | 71.6% |
| 4369841 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.61 | 48.0 | 3.39e-01 | 88.9% | 57.1% |
| 3267247 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.61 | 54.0 | 4.35e-01 | 100.0% | 65.0% |
| 4385879 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 48.0 | 3.37e-01 | 88.9% | 54.1% |
| 4163845 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 46.0 | 3.28e-01 | 86.1% | 54.8% |
| 5027110 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 48.0 | 3.33e-01 | 88.9% | 45.3% |
| 4350586 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 48.0 | 3.29e-01 | 88.9% | 51.6% |
| 4162000 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 48.0 | 3.31e-01 | 88.9% | 44.6% |
| 3754692 | 11.1.1.333 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YLDV-IL18BP-like | 0.60 | 50.0 | 4.32e-01 | 91.7% | 74.5% |
| 4337358 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 47.0 | 3.30e-01 | 88.9% | 53.5% |
| 3350908 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.60 | 47.0 | 3.26e-01 | 88.9% | 52.2% |
| 4588330 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 3.28e-01 | 88.9% | 54.2% |
| 5078833 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 3.31e-01 | 88.9% | 48.0% |
| 4067859 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 45.0 | 3.26e-01 | 86.1% | 55.5% |
| 4219826 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 3.31e-01 | 88.9% | 56.9% |
| 3262493 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.59 | 50.0 | 4.16e-01 | 93.1% | 60.0% |
| 4325674 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 46.0 | 3.27e-01 | 88.9% | 80.0% |
| 3962051 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 45.0 | 3.29e-01 | 83.3% | 43.3% |
| 4205662 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 46.0 | 3.27e-01 | 88.9% | 53.1% |
| 3613752 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 50.0 | 3.34e-01 | 93.1% | 46.6% |
| 4985721 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 3.24e-01 | 88.9% | 44.1% |
| 3900933 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.59 | 48.0 | 3.95e-01 | 93.1% | 49.3% |
| 4569317 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 45.0 | 3.19e-01 | 86.1% | 53.0% |
| 5082266 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 46.0 | 3.29e-01 | 88.9% | 48.2% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.59 | 46.0 | 3.36e-01 | 86.1% | 35.5% |
| 4936296 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 3.24e-01 | 88.9% | 45.7% |
| None | — | 0.58 | 46.0 | 3.29e-01 | 88.9% | 56.6% | |
| 4604606 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 45.0 | 3.18e-01 | 86.1% | 53.4% |
| 4550789 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 46.0 | 3.28e-01 | 88.9% | 56.3% |
| 5034259 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 46.0 | 3.23e-01 | 88.9% | 46.8% |
| 4246888 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 47.0 | 3.32e-01 | 91.7% | 47.6% |
| 4451796 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 47.0 | 3.29e-01 | 90.3% | 56.2% |
| 3267250 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.83e-01 | 97.2% | 100.0% |
| 4997642 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 46.0 | 3.16e-01 | 88.9% | 43.7% |
| 4304256 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 47.0 | 3.32e-01 | 91.7% | 57.8% |
| 4305191 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 45.0 | 3.16e-01 | 88.9% | 44.9% |
| 3592426 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.57 | 48.0 | 3.00e-01 | 94.4% | 48.6% |
| 5052292 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 45.0 | 3.11e-01 | 88.9% | 45.8% |
| 3206575 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.57 | 51.0 | 4.45e-01 | 100.0% | 69.1% |
| 4948136 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 45.0 | 3.18e-01 | 88.9% | 47.8% |
| 4138570 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 46.0 | 3.23e-01 | 90.3% | 56.7% |
| 3929182 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.56 | 48.0 | 4.24e-01 | 97.2% | 70.0% |
| 5080582 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.56 | 44.0 | 3.12e-01 | 88.9% | 52.7% |
| 3550747 | 11.1.1.189 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTCRA | 0.56 | 49.0 | 4.36e-01 | 100.0% | 75.2% |
| 1501 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 50.0 | 4.57e-01 | 100.0% | 80.9% |
| 5067082 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.56 | 45.0 | 3.12e-01 | 90.3% | 44.9% |
| 5025163 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 43.0 | 3.09e-01 | 88.9% | 48.3% |
| 4025202 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 45.0 | 2.99e-01 | 93.1% | 42.8% |
| 3559409 | 11.1.1.609 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NTCP5_P3_N | 0.53 | 47.0 | 4.17e-01 | 100.0% | 69.5% |
| 4993499 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 43.0 | 4.17e-01 | 91.7% | 95.0% |
| 3743560 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 44.0 | 2.97e-01 | 100.0% | 47.7% |
D3
high
residues 232-295
D4
medium
residues 106-213
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09097.18 best | Phage-tail_1 | 113.2 | 1.80e-32 | 82.4% | 45.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D02 | 3.55.50.20 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.95 | 75.0 | 8.34e-01 | 81.5% | 100.0% |
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.70 | 52.0 | 5.72e-01 | 85.2% | 97.6% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.70 | 54.0 | 5.79e-01 | 87.0% | 95.7% |
| 6j09A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.52 | 32.0 | 3.91e-01 | 83.3% | 100.0% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.95e-01 | 79.6% | 100.0% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 33.0 | 3.89e-01 | 81.5% | 97.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185932 | 3070.1.1.5 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage-tail_1 | 0.94 | 76.0 | 8.30e-01 | 82.4% | 98.9% |
| 5038671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 25.0 | 3.49e-01 | 73.1% | 74.0% |
| 5050805 | 377.2.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › zf-FPG_IleRS | 0.61 | 28.0 | 4.02e-01 | 77.8% | 100.0% |
| 3974527 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.60 | 47.0 | 5.03e-01 | 87.0% | 96.8% |
| 3287840 | 377.2.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › zf-FPG_IleRS | 0.59 | 25.0 | 3.62e-01 | 70.4% | 91.1% |
| 3504940 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 27.0 | 3.57e-01 | 77.8% | 86.0% |
| 3846283 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.55 | 27.0 | 3.56e-01 | 88.0% | 96.0% |
| 3289410 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 37.0 | 2.73e-01 | 75.0% | 94.7% |