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OY979424.1__CAK6607120.1__K41P2_LOCUS152__00152

Bact-Vir

OY979424.1__CAK6607120.1__K41P2_LOCUS152__00152

Identity

Accession:
OY979424 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Slopekvirus› Klebsiella_phage_vB_Ko_K41P2

TaxID: 3071626

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-101
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.69 48.0 5.03e-01 83.3% 81.7%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 50.0 4.72e-01 81.8% 98.8%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 52.0 4.71e-01 86.4% 92.2%
2yleA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.65 52.0 3.91e-01 89.4% 81.9%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.64 44.0 4.68e-01 72.7% 84.2%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 3.83e-01 80.3% 75.4%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.62 43.0 2.93e-01 71.2% 90.3%
1r8gA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.61 45.0 2.89e-01 81.8% 50.0%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.61 52.0 3.91e-01 98.5% 84.2%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.60 46.0 2.96e-01 86.4% 16.6%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 45.0 3.89e-01 87.9% 52.3%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 43.0 3.93e-01 83.3% 59.6%
1c4zA01 3.90.1750.10 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains 0.57 44.0 3.37e-01 84.8% 35.0%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.49e-01 81.8% 66.7%
1biqA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.56 47.0 3.03e-01 98.5% 33.2%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 3.07e-01 84.8% 29.3%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 39.0 3.73e-01 81.8% 65.4%
4lmiB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 37.0 2.99e-01 74.2% 72.1%
2hoxA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 35.0 2.92e-01 75.8% 38.9%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 3.04e-01 86.4% 41.8%
3unvA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.53 46.0 3.00e-01 100.0% 68.1%
6ks6a01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.53 45.0 3.03e-01 100.0% 34.7%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 3.05e-01 72.7% 69.6%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.52 45.0 3.36e-01 100.0% 42.2%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.52 35.0 3.40e-01 98.5% 63.9%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.39e-01 81.8% 56.7%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.37e-01 78.8% 54.8%
5x9vA01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.51 42.0 2.98e-01 100.0% 34.7%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038778 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.75 55.0 4.29e-01 77.3% 89.6%
4944680 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 51.0 2.92e-01 81.8% 7.1%
3602143 3755.3.1.305 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook 0.68 43.0 2.94e-01 81.8% 17.9%
3805561 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.65 51.0 4.19e-01 86.4% 86.4%
4963809 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.64 49.0 3.21e-01 83.3% 76.0%
3970671 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.64 45.0 4.30e-01 83.3% 64.0%
3589664 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 48.0 4.45e-01 81.8% 96.5%
5042767 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 48.0 4.27e-01 84.8% 59.2%
5081618 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 41.0 3.41e-01 81.8% 37.5%
4082175 3001.1.1.1 ↗ alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 0.61 42.0 3.93e-01 80.3% 56.5%
5040463 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.60 41.0 2.78e-01 74.2% 30.8%
3620075 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.60 52.0 4.65e-01 100.0% 92.6%
3482328 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 46.0 4.00e-01 87.9% 54.3%
3209417 261.1.1.1 ↗ a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT 0.59 47.0 2.87e-01 87.9% 82.7%
4398485 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.59 45.0 3.11e-01 84.8% 33.9%
3937568 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.59 50.0 4.61e-01 95.5% 90.6%
3834987 304.9.1.46 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PHM7_cyt 0.59 43.0 4.23e-01 81.8% 84.0%
3233807 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 49.0 4.86e-01 95.5% 94.3%
5029669 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 45.0 3.76e-01 87.9% 46.7%
3744005 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 45.0 3.34e-01 86.4% 56.2%
60305 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 45.0 3.93e-01 87.9% 53.8%
4298719 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.58 49.0 4.38e-01 98.5% 85.0%
3820897 109.4.1.1682 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHM7_cyt 0.57 45.0 4.48e-01 87.9% 85.7%
5068424 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 37.0 2.65e-01 84.8% 19.6%
3958678 3281.1.2.0 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related 0.57 48.0 3.42e-01 98.5% 49.3%
3735848 109.4.1.1553 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28151 0.57 45.0 2.54e-01 89.4% 6.5%
3848052 101.1.2.515 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_2nd_NFRKB 0.56 47.0 3.58e-01 95.5% 70.9%
4961174 5069.1.1.2 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ni_hydr_CYTB 0.56 46.0 3.20e-01 90.9% 57.4%
3980132 823.1.1.1 ↗ a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW 0.55 40.0 4.31e-01 86.4% 94.5%
3827431 192.17.1.16 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › PHM7_cyt 0.55 41.0 4.13e-01 81.8% 92.3%
3350649 192.8.1.342 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PHM7_cyt 0.55 43.0 3.90e-01 87.9% 63.2%
3707113 109.6.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF 0.55 47.0 3.11e-01 98.5% 38.0%
4030472 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.54 40.0 2.89e-01 78.8% 62.6%
3928048 261.1.1.1 ↗ a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT 0.54 41.0 2.53e-01 84.8% 13.2%
5055797 177.1.1.0 ↗ alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.53 39.0 2.85e-01 78.8% 91.1%
3345517 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.52 40.0 3.14e-01 84.8% 67.6%
5040127 5039.1.1.1 ↗ alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 0.52 45.0 3.05e-01 100.0% 45.3%
5041715 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.52 39.0 3.39e-01 83.3% 70.0%
3786195 109.6.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF 0.52 43.0 2.85e-01 100.0% 47.4%
3357520 310.2.1.28 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 0.51 36.0 3.33e-01 74.2% 91.8%
3222766 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.51 42.0 3.93e-01 98.5% 73.3%
3340818 2485.1.1.13 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N 0.51 31.0 2.98e-01 98.5% 48.8%