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OY979427.1__CAK6605664.1__K34PH164_LOCUS56__00056

Bact-Vir

OY979427.1__CAK6605664.1__K34PH164_LOCUS56__00056

Identity

Accession:
OY979427 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_vB_Kpn_K34PH164

TaxID: 3071674

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-104
PDB
Domain cluster: rep: JQ340774.2__AFB84085.1__X__00074__D2-58
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.68 54.0 3.97e-01 92.7% 34.3%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.67 56.0 4.49e-01 96.4% 51.8%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.63 54.0 4.45e-01 100.0% 55.8%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.62 50.0 4.16e-01 100.0% 49.5%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.02e-01 96.4% 85.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.79e-01 96.4% 81.8%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.59 48.0 3.42e-01 96.4% 29.8%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 3.78e-01 94.5% 65.4%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.94e-01 92.7% 79.6%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.66e-01 96.4% 87.1%
1e50B00 2.40.250.10 Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit 0.58 45.0 3.56e-01 90.9% 50.8%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 3.73e-01 89.1% 100.0%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 46.0 3.04e-01 98.2% 87.3%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 3.33e-01 98.2% 52.2%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 46.0 2.82e-01 96.4% 79.7%
3thxA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.55 39.0 2.83e-01 76.4% 43.6%
2yocA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.64e-01 92.7% 64.8%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.37e-01 96.4% 85.7%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.12e-01 100.0% 77.3%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.15e-01 100.0% 69.5%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 39.0 2.56e-01 80.0% 47.2%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.16e-01 96.4% 81.2%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.54 43.0 4.36e-01 94.5% 96.4%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.14e-01 96.4% 80.0%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 2.75e-01 100.0% 42.0%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 2.57e-01 92.7% 21.4%
3lmlA01 3.10.450.690 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.22e-01 85.5% 90.9%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 44.0 4.05e-01 98.2% 77.3%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 38.0 3.45e-01 83.6% 55.0%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.45e-01 100.0% 69.6%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.32e-01 89.1% 66.7%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 41.0 2.67e-01 94.5% 27.3%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 42.0 4.16e-01 92.7% 96.6%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.54e-01 98.2% 57.7%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 42.0 3.12e-01 96.4% 88.6%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.08e-01 80.0% 82.0%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.52 41.0 3.15e-01 90.9% 76.9%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 38.0 2.44e-01 81.8% 42.2%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.51 39.0 2.97e-01 89.1% 90.1%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 41.0 3.85e-01 100.0% 74.6%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.02e-01 92.7% 89.9%
1dlcA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.50 39.0 2.84e-01 94.5% 81.2%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.21e-01 100.0% 58.9%
5067458 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.54e-01 89.1% 94.5%
3280641 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.68 58.0 4.86e-01 100.0% 56.0%
4976092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.95e-01 100.0% 62.2%
4086925 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 53.0 5.09e-01 96.4% 81.5%
4981041 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.64 49.0 5.08e-01 85.5% 94.0%
3725169 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.62 50.0 3.67e-01 96.4% 34.3%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 51.0 4.85e-01 92.7% 81.5%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 53.0 5.06e-01 100.0% 86.2%
4020511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 3.80e-01 96.4% 40.7%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 50.0 4.79e-01 96.4% 81.8%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 51.0 4.88e-01 98.2% 84.6%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 50.0 4.80e-01 96.4% 83.1%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 49.0 4.67e-01 92.7% 81.5%
4101580 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 52.0 4.97e-01 100.0% 86.2%
1108449 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.59 48.0 3.42e-01 96.4% 29.8%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 49.0 4.73e-01 96.4% 83.1%
4942589 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 47.0 4.43e-01 94.5% 81.4%
4073200 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 49.0 4.74e-01 96.4% 84.6%
4104219 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 49.0 4.71e-01 100.0% 86.2%
4041586 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 51.0 4.84e-01 100.0% 86.2%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 48.0 4.65e-01 96.4% 83.1%
3407209 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.58 46.0 3.43e-01 96.4% 33.1%
3744711 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.58 47.0 3.49e-01 98.2% 34.1%
4446791 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 48.0 4.63e-01 96.4% 83.1%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 50.0 4.80e-01 100.0% 86.2%
3761045 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.58 46.0 2.84e-01 90.9% 88.1%
3586434 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.58 48.0 3.59e-01 100.0% 36.3%
4863266 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.58 45.0 4.38e-01 100.0% 76.9%
1108456 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.58 47.0 3.93e-01 98.2% 53.7%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 49.0 4.72e-01 100.0% 86.2%
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 48.0 4.64e-01 100.0% 86.2%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 47.0 4.53e-01 96.4% 86.2%
4955080 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 46.0 3.94e-01 92.7% 74.7%
3950208 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 49.0 4.69e-01 100.0% 86.2%
3791777 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.57 47.0 4.22e-01 100.0% 81.2%
3960657 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 42.0 3.92e-01 83.6% 70.7%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 47.0 4.53e-01 100.0% 84.6%
3925731 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.56 45.0 3.31e-01 98.2% 30.8%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 46.0 4.47e-01 96.4% 83.1%
4992704 2003.1.2.40 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.56 47.0 2.92e-01 98.2% 28.5%
4024137 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 44.0 3.18e-01 89.1% 51.8%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.55e-01 100.0% 86.2%
3931897 69.1.2.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › AXH › AXH 0.56 41.0 3.24e-01 81.8% 43.2%
None — 0.56 44.0 2.64e-01 94.5% 29.4%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.55 45.0 4.15e-01 96.4% 80.0%
3845291 220.1.1.119 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.55 46.0 3.10e-01 98.2% 29.4%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.26e-01 100.0% 74.7%
4779411 243.3.1.6 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin 0.55 33.0 3.61e-01 70.9% 75.0%
4507276 2.4.1.11 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.55 43.0 3.57e-01 90.9% 50.9%
3305439 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 2.82e-01 98.2% 93.6%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.55 44.0 4.04e-01 96.4% 68.8%
4999054 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 45.0 3.34e-01 98.2% 68.5%
4204465 881.1.1.36 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF25844 0.54 42.0 3.28e-01 89.1% 42.2%
3640328 4.1.1.411 ↗ beta barrels › SH3 › SH3 › SH3 › Pkinase_fungal 0.54 40.0 3.87e-01 89.1% 74.3%
4051081 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.54 45.0 4.45e-01 96.4% 93.3%
3796107 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.54 39.0 3.36e-01 87.3% 47.8%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.54 44.0 4.22e-01 100.0% 81.4%
5050831 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 44.0 3.38e-01 100.0% 98.7%
3736443 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.53 43.0 2.80e-01 98.2% 44.8%
85434 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.53 41.0 3.94e-01 89.1% 77.3%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.53 44.0 4.14e-01 100.0% 81.4%
4953347 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.53 36.0 3.75e-01 74.5% 92.0%
5025112 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.53 42.0 3.33e-01 92.7% 68.8%
5035327 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 40.0 3.57e-01 87.3% 98.8%
4996783 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.52 42.0 2.68e-01 100.0% 30.4%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 40.0 3.96e-01 100.0% 81.5%
3802876 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.52 40.0 2.62e-01 90.9% 30.5%
4990492 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 36.0 3.74e-01 72.7% 100.0%
2573476 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 42.0 2.87e-01 100.0% 43.4%
5042593 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.52 41.0 3.08e-01 92.7% 41.9%
3457581 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.52 41.0 2.56e-01 92.7% 26.1%
4029963 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.51 38.0 3.11e-01 83.6% 44.3%
5047172 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.51 41.0 3.01e-01 92.7% 52.9%