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OY979429.1__CAK6606360.1__K32PH164C1_LOCUS82__00082

Bact-Vir

OY979429.1__CAK6606360.1__K32PH164C1_LOCUS82__00082

Identity

Accession:
OY979429 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-48
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.87e-01 100.0% 57.3%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 64.0 5.98e-01 97.8% 69.5%
2j16A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.80 63.0 4.51e-01 87.0% 78.9%
3r64A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.79 58.0 3.49e-01 78.3% 13.0%
4d3pA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.79 64.0 4.45e-01 89.1% 80.3%
2esbA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.79 62.0 4.22e-01 87.0% 72.2%
2g6zA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.78 64.0 4.43e-01 89.1% 80.3%
2vk9A03 1.10.3730.30 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › 0.78 53.0 4.12e-01 71.7% 38.8%
4ki9A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.78 62.0 4.25e-01 87.0% 73.9%
1zzwA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.78 62.0 4.29e-01 87.0% 81.6%
3emuA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.78 60.0 4.20e-01 84.8% 77.1%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 6.01e-01 100.0% 78.2%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.78 66.0 5.27e-01 100.0% 61.9%
2nt2A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.77 61.0 4.28e-01 87.0% 83.1%
2b0jA02 1.20.120.1300 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain 0.77 52.0 4.16e-01 71.7% 37.0%
7eebI01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.77 59.0 3.90e-01 82.6% 52.1%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 59.0 3.72e-01 100.0% 16.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.57e-01 100.0% 64.1%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 6.10e-01 95.7% 91.7%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.51e-01 100.0% 74.1%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.47e-01 95.7% 100.0%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.72 51.0 3.65e-01 78.3% 26.7%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.71 59.0 5.19e-01 93.5% 66.7%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.30e-01 100.0% 65.8%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.43e-01 100.0% 73.8%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 60.0 5.05e-01 100.0% 93.9%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.58e-01 100.0% 44.3%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.35e-01 97.8% 73.8%
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.70 59.0 4.79e-01 100.0% 71.3%
2h56A02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.70 61.0 4.53e-01 97.8% 95.6%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.70 57.0 3.51e-01 100.0% 31.5%
1f20A01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.69 57.0 3.92e-01 93.5% 30.1%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 4.66e-01 100.0% 56.9%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.52e-01 78.3% 67.2%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 43.0 3.45e-01 97.8% 34.9%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.67 50.0 3.78e-01 84.8% 95.9%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.66 53.0 4.86e-01 97.8% 77.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.27e-01 95.7% 47.7%
7tm7B01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.65 56.0 3.24e-01 100.0% 36.4%
2ftxA00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.64 43.0 3.42e-01 80.4% 36.0%
1f0yA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.63 50.0 4.27e-01 97.8% 86.2%
1z8fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 3.40e-01 89.1% 71.1%
2dkzA01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.58 45.0 4.26e-01 100.0% 70.5%
3mc1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 47.0 4.29e-01 97.8% 71.6%
1z82B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 43.0 3.35e-01 100.0% 47.8%
4bvxA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.55 47.0 3.64e-01 100.0% 42.9%
3gkfA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 45.0 2.86e-01 97.8% 16.3%
4nv0A02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.55 40.0 3.31e-01 78.3% 43.9%
4mozD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 44.0 2.74e-01 97.8% 15.3%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.53 39.0 3.53e-01 89.1% 60.0%
4ielA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 44.0 3.36e-01 100.0% 61.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013347 101.1.2.946 alpha arrays › HTH › HTH › winged helix domain › PF26555 0.91 78.0 7.95e-01 93.5% 100.0%
4032197 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.86 75.0 5.59e-01 100.0% 40.9%
5031401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 75.0 6.23e-01 100.0% 62.5%
4033200 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 62.0 6.29e-01 78.3% 80.0%
3310491 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 6.59e-01 95.7% 78.3%
5042980 101.35.1.41 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26555 0.84 74.0 7.23e-01 100.0% 94.0%
3672635 101.1.1.295 alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.83 72.0 6.20e-01 100.0% 66.7%
3439843 101.1.1.270 alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.83 72.0 5.94e-01 100.0% 56.5%
3293154 101.1.2.472 alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 0.83 71.0 6.56e-01 100.0% 80.0%
4984847 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.82 71.0 6.39e-01 100.0% 70.8%
3932033 102.1.1.8 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › BAF 0.82 72.0 6.07e-01 97.8% 85.3%
5053497 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 71.0 6.55e-01 100.0% 83.3%
3341091 101.35.1.6 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 0.81 69.0 6.26e-01 100.0% 73.8%
3340005 101.1.2.472 alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 0.81 69.0 5.61e-01 100.0% 51.1%
3989662 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.81 68.0 5.07e-01 100.0% 37.6%
4031683 101.1.2.478 alpha arrays › HTH › HTH › winged helix domain › ssDNA-exonuc_C 0.80 67.0 6.25e-01 97.8% 75.0%
4025313 3721.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 0.80 56.0 4.80e-01 71.7% 60.0%
3518858 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.78e-01 100.0% 63.7%
4983598 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 67.0 6.10e-01 100.0% 78.5%
3281058 101.35.1.10 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF4287 0.79 67.0 6.23e-01 97.8% 75.0%
1169399 101.35.1.2 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp 0.79 67.0 6.50e-01 97.8% 86.5%
3240699 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.78 66.0 5.85e-01 100.0% 70.0%
3904610 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.45e-01 100.0% 95.6%
5010323 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.23e-01 100.0% 76.7%
4199578 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.78 70.0 4.13e-01 100.0% 30.6%
3931388 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 6.23e-01 100.0% 83.6%
4976919 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.76 65.0 5.14e-01 100.0% 53.0%
4895784 101.1.2.623 alpha arrays › HTH › HTH › winged helix domain › PF25983 0.75 59.0 5.33e-01 100.0% 62.7%
4929489 101.1.2.897 alpha arrays › HTH › HTH › winged helix domain › Zn_ribbon_2 0.75 64.0 5.72e-01 97.8% 95.4%
3380987 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.73 64.0 5.74e-01 100.0% 89.2%
3587199 101.39.1.1 alpha arrays › HTH › Replication protein RepB C-terminal domain › Replication protein RepB C-terminal domain › RepB_C 0.73 63.0 5.81e-01 100.0% 85.0%
3223878 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.72 59.0 4.32e-01 100.0% 33.1%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 57.0 4.46e-01 95.7% 42.0%
4466431 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.70 57.0 3.51e-01 95.7% 40.3%
4156281 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.69 59.0 3.64e-01 100.0% 84.9%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 55.0 4.79e-01 95.7% 57.3%
3237714 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.55e-01 95.7% 97.8%
3234409 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.67 54.0 4.42e-01 100.0% 51.5%
3797568 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 56.0 5.20e-01 100.0% 78.3%
4034503 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.66 54.0 4.95e-01 100.0% 69.2%
4928626 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 54.0 3.29e-01 93.5% 89.1%
3544446 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.64 53.0 4.94e-01 97.8% 80.0%
4964562 5060.2.1.1 alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.64 52.0 3.88e-01 100.0% 69.6%
3171139 7022.1.1.1 alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.58 46.0 3.26e-01 100.0% 83.8%
4954401 129.1.1.9 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C 0.56 43.0 3.30e-01 100.0% 44.8%
3843913 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.56 45.0 3.14e-01 100.0% 65.4%
4954814 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 46.0 2.79e-01 100.0% 49.4%
4950752 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 46.0 2.77e-01 100.0% 16.7%
3270860 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.54 43.0 3.14e-01 100.0% 78.1%
3566988 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.51 40.0 3.04e-01 93.5% 86.9%