Orf_1629

Euk-Vir

Lonomia_obliqua_multiple_nucleopolyhedrovirus

Orf_1629__YP_009666364__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394

Identity

62.7 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lonomia_obliqua_multiple_nucleopolyhedrovirus

TaxID: 134394

View cluster (3 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-71

PDB

Domain cluster: rep: pp78_83_protein__YP_007250420__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D7-56

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5u9zA01	3.40.720.10	Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A	0.60	50.0	3.17e-01	94.0%	76.0%
3l1nA01	6.10.140.790	Special › Helix non-globular › Helix Hairpins ›	0.60	38.0	4.27e-01	94.0%	86.3%
1r4gA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.56	37.0	4.02e-01	70.1%	84.9%
1eb7A01	1.10.760.10	Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain	0.55	39.0	3.07e-01	79.1%	34.5%
1jlcB03	3.30.70.270	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain	0.54	46.0	3.75e-01	97.0%	79.7%
7aalA01	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.54	44.0	3.04e-01	94.0%	78.9%
2rkhA02	1.20.1280.20	Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain	0.54	35.0	3.43e-01	94.0%	59.2%
3favD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.53	39.0	3.69e-01	94.0%	65.4%
6tkvA01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.51	35.0	3.49e-01	92.5%	69.1%
3hgkE00	1.20.1280.110	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.51	42.0	4.08e-01	94.0%	80.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3451334	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.61	40.0	3.89e-01	94.0%	61.3%
4169130	102.1.1.5 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_LFY	0.61	43.0	3.93e-01	74.6%	86.7%
None	—		0.55	38.0	2.51e-01	94.0%	18.1%
5047970	2003.1.6.1 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin	0.53	41.0	2.83e-01	86.6%	89.8%
None	—		0.53	40.0	2.69e-01	82.1%	97.9%
5002652	205.1.1.19 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13	0.53	39.0	3.85e-01	79.1%	92.9%
4649431	3524.1.1.2 ↗	alpha arrays › Uncharacterized protein encoded by cryptic prophage › Uncharacterized protein encoded by cryptic prophage › Uncharacterized protein encoded by cryptic prophage › PF29794	0.50	42.0	3.79e-01	100.0%	81.8%
3313517	7013.1.1.1 ↗	alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1	0.50	37.0	2.94e-01	80.6%	57.3%

D2 medium residues 76-141

PDB

Domain cluster: rep: pp78_83_protein__YP_007250420__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D59-124

D3 medium residues 385-542

PDB

Domain cluster: rep: ORF1629__YP_003517742__Lymantria_xylina_nucleopolyhedrovirus__166921__D374-505