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P0_An_GD2017L_S7_coassembly_k141_2695417_prodigal-single.1__X__X__00010
Bact-VirP0_An_GD2017L_S7_coassembly_k141_2695417_prodigal-single.1__X__X__00010
Identity
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-149
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ekfA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 33.0 | 4.76e-01 | 94.1% | 95.7% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 4.79e-01 | 90.1% | 75.3% |
| 5bpdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 5.16e-01 | 85.1% | 97.3% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.54e-01 | 86.1% | 85.1% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.01e-01 | 87.1% | 57.0% |
| 3jsyA02 | 3.90.105.20 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II | 0.57 | 32.0 | 3.54e-01 | 92.1% | 68.8% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.55 | 37.0 | 3.98e-01 | 95.0% | 80.7% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 4.31e-01 | 97.0% | 84.6% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 37.0 | 3.78e-01 | 72.3% | 100.0% |
| 4c9yA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.53 | 39.0 | 3.69e-01 | 77.2% | 100.0% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 37.0 | 4.14e-01 | 72.3% | 100.0% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.53 | 37.0 | 3.82e-01 | 72.3% | 97.9% |
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 39.0 | 4.19e-01 | 98.0% | 100.0% |
| 2lycA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.51 | 46.0 | 4.23e-01 | 100.0% | 100.0% |
| 2q9rA01 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.50 | 38.0 | 3.07e-01 | 79.2% | 53.8% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.50 | 36.0 | 2.96e-01 | 75.2% | 95.8% |
| 4nwbA02 | 3.90.105.20 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Ribosomal protein L10, N-terminal fragment, domain II | 0.50 | 29.0 | 3.14e-01 | 92.1% | 66.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077965 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 4.68e-01 | 95.0% | 58.0% |
| 4945311 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 48.0 | 4.65e-01 | 97.0% | 71.3% |
| 4003682 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 41.0 | 4.63e-01 | 99.0% | 92.0% |
| 3238786 | 3818.1.1.1 ↗ | alpha arrays › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX_RNA-bd | 0.58 | 43.0 | 4.26e-01 | 98.0% | 71.8% |
| 4026235 | 3818.1.1.1 ↗ | alpha arrays › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX_RNA-bd | 0.58 | 45.0 | 4.39e-01 | 96.0% | 75.5% |
| 3837457 | 101.1.2.303 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5 | 0.58 | 36.0 | 4.31e-01 | 84.2% | 98.5% |
| 5052187 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 4.05e-01 | 89.1% | 94.3% |
| 1901952 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.50 | 35.0 | 2.79e-01 | 72.3% | 67.0% |
D2
high
residues 159-283
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.74 | 43.0 | 5.20e-01 | 83.2% | 86.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070853 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 48.0 | 5.82e-01 | 80.8% | 84.7% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 46.0 | 5.90e-01 | 72.0% | 92.0% |
| 4839754 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.79 | 46.0 | 4.32e-01 | 84.0% | 48.0% |
| 185780 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 45.0 | 5.14e-01 | 84.8% | 75.3% |
| 5080086 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.77 | 44.0 | 5.43e-01 | 79.2% | 88.7% |
| 5016552 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.74 | 44.0 | 4.70e-01 | 73.6% | 67.3% |
| 2991844 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.72 | 46.0 | 4.97e-01 | 84.0% | 74.3% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.72 | 44.0 | 4.71e-01 | 73.6% | 70.0% |
| 3953059 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.71 | 47.0 | 5.48e-01 | 84.0% | 93.3% |
| 4607935 | 378.1.1.29 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › ICEA | 0.71 | 55.0 | 5.50e-01 | 80.8% | 90.0% |
| 3343086 | 378.1.1.5 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_1 | 0.69 | 50.0 | 4.07e-01 | 74.4% | 75.4% |
| 3952923 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.67 | 46.0 | 5.14e-01 | 86.4% | 88.0% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.67 | 47.0 | 4.87e-01 | 87.2% | 77.4% |
| 3944337 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.66 | 44.0 | 4.31e-01 | 74.4% | 62.2% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.66 | 44.0 | 4.75e-01 | 76.8% | 78.2% |
| 3914801 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.65 | 48.0 | 4.87e-01 | 76.8% | 81.6% |
| 3412005 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.65 | 48.0 | 4.64e-01 | 76.8% | 72.9% |
| 3269193 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.65 | 49.0 | 4.78e-01 | 78.4% | 86.7% |
| 4056680 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.64 | 47.0 | 4.78e-01 | 84.0% | 78.3% |
| 3434619 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 46.0 | 4.82e-01 | 74.4% | 94.7% |
| 3602299 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 45.0 | 4.24e-01 | 97.6% | 60.7% |
| 3324312 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.60 | 42.0 | 4.46e-01 | 71.2% | 92.7% |
| None | — | 0.60 | 46.0 | 4.42e-01 | 80.8% | 96.6% | |
| 3637715 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.59 | 47.0 | 4.43e-01 | 84.0% | 75.3% |
| 3928471 | 376.1.3.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RH_dom | 0.59 | 36.0 | 4.20e-01 | 78.4% | 85.6% |
| 3685300 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.58 | 46.0 | 3.84e-01 | 84.8% | 58.2% |
| 2628026 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.55 | 43.0 | 3.64e-01 | 81.6% | 75.2% |