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P0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00200
Bact-VirP0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00200
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03412.22 best | Peptidase_C39 | 25.1 | 1.90e-05 | 98.3% | 36.8% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.96 | 84.0 | 6.24e-01 | 91.7% | 42.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.93 | 85.0 | 6.22e-01 | 96.7% | 41.1% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.80 | 63.0 | 4.85e-01 | 90.0% | 38.9% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.73 | 56.0 | 5.51e-01 | 86.7% | 76.6% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 51.0 | 5.01e-01 | 86.7% | 74.6% |
| 3zxxA00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.67 | 56.0 | 3.68e-01 | 95.0% | 98.5% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 49.0 | 4.73e-01 | 85.0% | 68.6% |
| 4aktB00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.67 | 56.0 | 3.55e-01 | 96.7% | 92.9% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 54.0 | 5.22e-01 | 86.7% | 80.3% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 50.0 | 4.86e-01 | 86.7% | 74.6% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.65 | 51.0 | 3.28e-01 | 86.7% | 33.2% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.65 | 52.0 | 5.01e-01 | 86.7% | 76.8% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 56.0 | 4.24e-01 | 100.0% | 68.0% |
| 2zg6A02 | 1.10.150.660 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 51.0 | 4.83e-01 | 86.7% | 81.9% |
| 1hqcA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 53.0 | 4.97e-01 | 98.3% | 97.4% |
| 2yb1A02 | 1.10.150.650 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.61 | 46.0 | 4.44e-01 | 88.3% | 76.7% |
| 4fwdA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 49.0 | 4.58e-01 | 95.0% | 97.4% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.61 | 50.0 | 4.79e-01 | 98.3% | 90.3% |
| 3d31A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 44.0 | 3.09e-01 | 83.3% | 27.3% |
| 3e0fA02 | 1.10.150.650 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 45.0 | 4.34e-01 | 86.7% | 75.7% |
| 2ofyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 42.0 | 4.02e-01 | 76.7% | 77.1% |
| 3a1sA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.58e-01 | 90.0% | 55.7% |
| 2bo4A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 44.0 | 3.21e-01 | 98.3% | 90.1% |
| 2qq6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 44.0 | 3.70e-01 | 100.0% | 58.6% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.53 | 37.0 | 3.34e-01 | 75.0% | 95.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4562486 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.96 | 91.0 | 6.45e-01 | 100.0% | 38.7% |
| 3255741 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.94 | 89.0 | 6.09e-01 | 100.0% | 47.2% |
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.94 | 89.0 | 6.59e-01 | 100.0% | 44.4% |
| 5030431 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.93 | 88.0 | 5.92e-01 | 100.0% | 34.2% |
| 2444014 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.93 | 88.0 | 6.40e-01 | 100.0% | 42.3% |
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.93 | 87.0 | 5.94e-01 | 100.0% | 41.6% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.93 | 87.0 | 6.33e-01 | 100.0% | 41.4% |
| 5021635 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.91 | 84.0 | 6.04e-01 | 100.0% | 42.9% |
| 5018522 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.91 | 84.0 | 5.62e-01 | 100.0% | 34.1% |
| 3972041 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.89 | 83.0 | 5.87e-01 | 100.0% | 37.5% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.88 | 80.0 | 5.82e-01 | 100.0% | 39.3% |
| 5012604 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.86 | 79.0 | 5.28e-01 | 100.0% | 51.9% |
| 3987478 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.85 | 78.0 | 5.91e-01 | 100.0% | 46.2% |
| 3972956 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 76.0 | 5.61e-01 | 100.0% | 41.4% |
| 4957284 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.80 | 73.0 | 5.15e-01 | 100.0% | 41.7% |
| 4937587 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 72.0 | 5.12e-01 | 100.0% | 35.8% |
| 185622 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.79 | 64.0 | 4.88e-01 | 90.0% | 39.0% |
| 5052629 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 69.0 | 4.90e-01 | 100.0% | 42.9% |
| 3228016 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.76 | 66.0 | 4.81e-01 | 96.7% | 65.5% |
| 3615364 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.73 | 61.0 | 4.31e-01 | 95.0% | 34.7% |
| 3988157 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.72 | 56.0 | 3.89e-01 | 88.3% | 26.3% |
| 3615365 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 63.0 | 4.24e-01 | 100.0% | 49.6% |
| 3240015 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.71 | 53.0 | 5.19e-01 | 85.0% | 73.8% |
| 4509953 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.71 | 56.0 | 3.77e-01 | 85.0% | 32.4% |
| 4989044 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.70 | 59.0 | 4.26e-01 | 95.0% | 36.0% |
| 5010950 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 50.0 | 4.84e-01 | 85.0% | 68.6% |
| 3581144 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.67 | 46.0 | 4.74e-01 | 78.3% | 78.2% |
| 4312875 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.65 | 51.0 | 4.47e-01 | 88.3% | 68.4% |
| 3494690 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 39.0 | 3.50e-01 | 70.0% | 94.4% |
| 3256076 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 47.0 | 4.29e-01 | 95.0% | 81.2% |
| 2775 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 41.0 | 3.76e-01 | 76.7% | 65.9% |
| 5077698 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.57 | 40.0 | 2.61e-01 | 73.3% | 34.0% |
| 5070095 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.54 | 45.0 | 3.84e-01 | 96.7% | 62.9% |
| 5042403 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.54 | 39.0 | 3.11e-01 | 78.3% | 45.2% |
| 4970414 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.54 | 44.0 | 4.12e-01 | 90.0% | 96.0% |
| 3512772 | 206.1.1.28 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Haspin_kinase | 0.52 | 39.0 | 2.64e-01 | 81.7% | 26.1% |
D2
medium
residues 61-150
Domain cluster:
rep: RTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00098__D78-155
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12385.15 best | Peptidase_C70 | 21.0 | 3.80e-04 | 70.0% | 37.6% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.87 | 65.0 | 5.75e-01 | 100.0% | 56.0% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.84 | 63.0 | 5.48e-01 | 100.0% | 54.2% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.83 | 67.0 | 5.77e-01 | 100.0% | 58.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 64.0 | 5.40e-01 | 100.0% | 51.8% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.80 | 72.0 | 5.38e-01 | 97.8% | 47.6% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.78 | 49.0 | 4.58e-01 | 96.7% | 51.3% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.77 | 72.0 | 5.40e-01 | 100.0% | 51.5% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.74 | 48.0 | 5.75e-01 | 86.7% | 100.0% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 46.0 | 5.28e-01 | 84.4% | 90.5% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 42.0 | 5.17e-01 | 85.6% | 100.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 42.0 | 4.66e-01 | 87.8% | 75.4% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 40.0 | 5.07e-01 | 82.2% | 100.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.71 | 51.0 | 5.72e-01 | 91.1% | 100.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 46.0 | 5.25e-01 | 87.8% | 90.9% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 4.90e-01 | 92.2% | 85.9% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.70 | 48.0 | 4.35e-01 | 97.8% | 52.8% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 43.0 | 5.16e-01 | 88.9% | 100.0% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.69 | 58.0 | 5.85e-01 | 100.0% | 90.2% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.69 | 61.0 | 4.50e-01 | 96.7% | 39.4% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 40.0 | 4.94e-01 | 84.4% | 100.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 45.0 | 5.06e-01 | 88.9% | 90.9% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 39.0 | 4.90e-01 | 77.8% | 100.0% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 40.0 | 4.78e-01 | 84.4% | 89.8% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.67 | 37.0 | 4.73e-01 | 92.2% | 100.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.67 | 39.0 | 4.77e-01 | 93.3% | 98.1% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 45.0 | 4.88e-01 | 93.3% | 84.9% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 42.0 | 4.98e-01 | 85.6% | 100.0% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.65 | 37.0 | 4.54e-01 | 73.3% | 92.6% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 40.0 | 4.41e-01 | 82.2% | 78.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 41.0 | 4.68e-01 | 81.1% | 89.2% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.52e-01 | 82.2% | 75.0% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.87e-01 | 86.7% | 85.5% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 38.0 | 4.54e-01 | 83.3% | 98.2% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.98e-01 | 84.4% | 100.0% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 40.0 | 4.77e-01 | 74.4% | 100.0% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.62 | 36.0 | 4.47e-01 | 70.0% | 100.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 4.55e-01 | 75.6% | 93.8% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.61 | 52.0 | 4.36e-01 | 100.0% | 54.4% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 52.0 | 4.04e-01 | 97.8% | 50.2% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.59 | 43.0 | 4.25e-01 | 90.0% | 72.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.72e-01 | 87.8% | 86.5% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 39.0 | 4.11e-01 | 76.7% | 77.2% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.58 | 52.0 | 4.06e-01 | 97.8% | 49.7% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.13e-01 | 90.0% | 67.4% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.57 | 40.0 | 3.74e-01 | 87.8% | 59.6% |
| 1wjrA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.17e-01 | 90.0% | 80.3% |
| 1wjsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.21e-01 | 91.1% | 70.9% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 40.0 | 4.28e-01 | 75.6% | 87.2% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.76e-01 | 91.1% | 77.1% |
| 4k8wA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.53 | 46.0 | 4.17e-01 | 94.4% | 89.8% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 41.0 | 3.61e-01 | 85.6% | 81.8% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 4.08e-01 | 84.4% | 94.4% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 36.0 | 2.43e-01 | 72.2% | 23.4% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 3.51e-01 | 85.6% | 94.9% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 43.0 | 2.96e-01 | 96.7% | 36.5% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 41.0 | 3.34e-01 | 91.1% | 85.4% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 43.0 | 3.03e-01 | 96.7% | 35.3% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.50 | 43.0 | 3.61e-01 | 96.7% | 73.4% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972547 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.93 | 72.0 | 5.77e-01 | 100.0% | 45.0% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.90 | 68.0 | 6.37e-01 | 100.0% | 66.7% |
| 3963455 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.86 | 71.0 | 5.95e-01 | 100.0% | 53.8% |
| 4023279 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.82 | 78.0 | 6.07e-01 | 100.0% | 57.7% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 53.0 | 6.42e-01 | 91.1% | 98.3% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.82 | 67.0 | 5.65e-01 | 100.0% | 55.0% |
| 3278994 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.82 | 77.0 | 6.05e-01 | 100.0% | 60.0% |
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.81 | 75.0 | 5.81e-01 | 100.0% | 52.4% |
| 4015071 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 52.0 | 5.78e-01 | 90.0% | 84.3% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 49.0 | 5.99e-01 | 84.4% | 100.0% |
| 4994957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 49.0 | 6.00e-01 | 87.8% | 100.0% |
| 5058671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 47.0 | 5.81e-01 | 88.9% | 96.4% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 46.0 | 4.73e-01 | 88.9% | 64.7% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.75 | 52.0 | 5.71e-01 | 90.0% | 86.7% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 49.0 | 5.68e-01 | 90.0% | 93.8% |
| 3875218 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.74 | 45.0 | 5.20e-01 | 83.3% | 86.2% |
| 3261395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 45.0 | 5.38e-01 | 86.7% | 94.8% |
| 3485965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 45.0 | 5.36e-01 | 88.9% | 93.3% |
| 3622846 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.73 | 41.0 | 5.22e-01 | 80.0% | 100.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 50.0 | 5.76e-01 | 92.2% | 98.5% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 49.0 | 5.76e-01 | 88.9% | 100.0% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.72 | 45.0 | 5.02e-01 | 84.4% | 81.4% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 51.0 | 5.39e-01 | 91.1% | 83.7% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 50.0 | 5.09e-01 | 93.3% | 73.3% |
| 3651961 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.71 | 43.0 | 5.29e-01 | 91.1% | 100.0% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 42.0 | 5.14e-01 | 86.7% | 96.4% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 49.0 | 5.63e-01 | 90.0% | 100.0% |
| 3520312 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 49.0 | 5.10e-01 | 73.3% | 81.2% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 5.20e-01 | 87.8% | 100.0% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 5.17e-01 | 90.0% | 100.0% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.70 | 42.0 | 4.73e-01 | 87.8% | 78.6% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 50.0 | 5.08e-01 | 94.4% | 75.6% |
| 3275404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 45.0 | 5.25e-01 | 73.3% | 98.3% |
| 4098445 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.69 | 40.0 | 4.79e-01 | 86.7% | 86.7% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 52.0 | 5.62e-01 | 94.4% | 95.9% |
| 5022491 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.69 | 57.0 | 5.87e-01 | 96.7% | 92.9% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.69 | 41.0 | 4.83e-01 | 84.4% | 88.3% |
| 3620094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 40.0 | 4.88e-01 | 81.1% | 94.5% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 44.0 | 4.87e-01 | 90.0% | 82.9% |
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.69 | 39.0 | 4.50e-01 | 82.2% | 76.9% |
| 3358753 | 4.1.1.381 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 | 0.69 | 42.0 | 3.47e-01 | 88.9% | 33.9% |
| 4890270 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.69 | 39.0 | 4.76e-01 | 92.2% | 92.6% |
| 3877485 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 44.0 | 4.57e-01 | 93.3% | 69.4% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 43.0 | 4.93e-01 | 81.1% | 87.7% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 49.0 | 5.03e-01 | 94.4% | 78.8% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.22e-01 | 87.8% | 91.4% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.68 | 39.0 | 4.43e-01 | 74.4% | 76.9% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 42.0 | 4.94e-01 | 87.8% | 93.3% |
| 3830187 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 41.0 | 4.94e-01 | 86.7% | 98.2% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.65e-01 | 86.7% | 86.7% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.67 | 41.0 | 4.60e-01 | 87.8% | 80.0% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 41.0 | 3.41e-01 | 86.7% | 35.5% |
| 3854862 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 44.0 | 4.32e-01 | 93.3% | 63.2% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 41.0 | 4.83e-01 | 85.6% | 93.3% |
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 38.0 | 4.46e-01 | 78.9% | 83.3% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.66 | 41.0 | 4.52e-01 | 84.4% | 78.6% |
| 3230083 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 45.0 | 4.60e-01 | 93.3% | 71.1% |
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.66 | 41.0 | 4.28e-01 | 90.0% | 67.1% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 46.0 | 4.70e-01 | 95.6% | 76.5% |
| 1759629 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.65 | 45.0 | 4.31e-01 | 75.6% | 60.7% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 43.0 | 4.55e-01 | 93.3% | 76.2% |
| 3402950 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.65 | 50.0 | 3.16e-01 | 82.2% | 94.4% |
| 164934 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 40.0 | 4.41e-01 | 82.2% | 78.9% |
| 4508244 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.65 | 49.0 | 3.38e-01 | 81.1% | 47.5% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.64 | 53.0 | 5.63e-01 | 93.3% | 100.0% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 45.0 | 4.68e-01 | 93.3% | 77.6% |
| 1759628 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.64 | 49.0 | 3.64e-01 | 81.1% | 65.3% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 42.0 | 4.77e-01 | 91.1% | 100.0% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 44.0 | 4.44e-01 | 94.4% | 71.1% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.63 | 44.0 | 5.05e-01 | 73.3% | 100.0% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 43.0 | 4.31e-01 | 93.3% | 70.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 41.0 | 4.24e-01 | 93.3% | 70.6% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 4.64e-01 | 82.2% | 73.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 42.0 | 4.23e-01 | 93.3% | 71.1% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 45.0 | 4.50e-01 | 94.4% | 77.8% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.74e-01 | 87.8% | 88.7% |
| 3752623 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.60 | 50.0 | 4.75e-01 | 90.0% | 89.5% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 54.0 | 4.98e-01 | 100.0% | 99.1% |
| None | — | 0.59 | 43.0 | 2.51e-01 | 90.0% | 8.7% | |
| 3858084 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.58 | 44.0 | 3.82e-01 | 81.1% | 82.9% |
| 3488888 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.58 | 47.0 | 4.39e-01 | 90.0% | 81.7% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 51.0 | 4.95e-01 | 96.7% | 96.0% |
| 3763814 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.57 | 48.0 | 4.16e-01 | 91.1% | 68.1% |
| 3492982 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.56 | 42.0 | 3.75e-01 | 81.1% | 85.2% |
| 3498280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 3.80e-01 | 81.1% | 88.5% |
| 3931905 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 46.0 | 4.26e-01 | 90.0% | 92.2% |
| None | — | 0.56 | 45.0 | 2.61e-01 | 87.8% | 79.2% | |
| 3326962 | 3794.1.1.3 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT | 0.55 | 40.0 | 3.56e-01 | 76.7% | 83.0% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.55 | 42.0 | 4.57e-01 | 84.4% | 98.7% |
| 3198731 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.53 | 46.0 | 4.06e-01 | 94.4% | 85.4% |
| 4121981 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.53 | 45.0 | 4.10e-01 | 95.6% | 92.0% |
| 3412833 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.53 | 38.0 | 3.52e-01 | 77.8% | 70.8% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.52 | 46.0 | 4.31e-01 | 95.6% | 94.5% |
| 4026284 | 331.17.1.1 ↗ | a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 | 0.51 | 41.0 | 3.44e-01 | 93.3% | 69.0% |