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P0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00276
Bact-VirP0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00276
Identity
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-106
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 55.0 | 6.33e-01 | 100.0% | 98.0% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 52.0 | 5.37e-01 | 100.0% | 70.8% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 54.0 | 4.73e-01 | 100.0% | 49.0% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 55.0 | 4.35e-01 | 100.0% | 39.1% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 50.0 | 5.30e-01 | 100.0% | 78.3% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.19e-01 | 100.0% | 69.7% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 53.0 | 5.23e-01 | 100.0% | 75.0% |
| 2d9uA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 44.0 | 4.29e-01 | 84.1% | 59.5% |
| 3lkmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 59.0 | 4.62e-01 | 100.0% | 84.7% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 58.0 | 5.08e-01 | 100.0% | 64.6% |
| 1ia9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 55.0 | 4.33e-01 | 100.0% | 91.0% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 46.0 | 4.48e-01 | 100.0% | 74.7% |
| 2b39A13 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 49.0 | 3.98e-01 | 91.3% | 69.9% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 3.42e-01 | 100.0% | 38.4% |
| 1nh2C00 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.56 | 35.0 | 3.87e-01 | 88.4% | 88.0% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 42.0 | 3.99e-01 | 82.6% | 92.6% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 3.78e-01 | 100.0% | 88.0% |
| 4twlA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.53 | 42.0 | 2.93e-01 | 88.4% | 51.5% |
| 2oafB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 37.0 | 3.06e-01 | 76.8% | 77.1% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.71e-01 | 95.7% | 87.2% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 37.0 | 2.92e-01 | 78.3% | 74.8% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 40.0 | 3.66e-01 | 89.9% | 63.8% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 37.0 | 3.62e-01 | 91.3% | 70.5% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 44.0 | 3.42e-01 | 100.0% | 78.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3876680 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.79 | 58.0 | 5.07e-01 | 100.0% | 53.0% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.79 | 58.0 | 4.19e-01 | 100.0% | 29.4% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 56.0 | 4.57e-01 | 100.0% | 43.3% |
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 54.0 | 5.76e-01 | 100.0% | 88.3% |
| 147797 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.73 | 53.0 | 5.42e-01 | 100.0% | 77.9% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.73 | 58.0 | 5.83e-01 | 100.0% | 84.3% |
| 3286662 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.72 | 49.0 | 4.32e-01 | 100.0% | 49.0% |
| 5002153 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.71 | 53.0 | 4.71e-01 | 94.2% | 55.0% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 57.0 | 5.53e-01 | 100.0% | 78.7% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.70 | 49.0 | 4.45e-01 | 100.0% | 55.6% |
| 3867207 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.70 | 55.0 | 4.92e-01 | 100.0% | 61.1% |
| 3519122 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.68 | 49.0 | 4.48e-01 | 100.0% | 57.8% |
| 4545520 | 4.7.1.7 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL | 0.67 | 49.0 | 4.57e-01 | 100.0% | 62.4% |
| 1117666 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.67 | 58.0 | 5.36e-01 | 100.0% | 75.3% |
| 4992039 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.66 | 41.0 | 4.06e-01 | 98.6% | 59.5% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.65 | 49.0 | 4.23e-01 | 100.0% | 52.4% |
| 4183853 | 4.1.1.435 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29216 | 0.65 | 47.0 | 4.72e-01 | 100.0% | 75.7% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 47.0 | 4.04e-01 | 100.0% | 49.1% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 55.0 | 4.01e-01 | 100.0% | 37.1% |
| 4269861 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 4.83e-01 | 95.7% | 75.0% |
| 3926950 | 4.1.1.214 ↗ | beta barrels › SH3 › SH3 › SH3 › GCN5L1 | 0.62 | 55.0 | 4.48e-01 | 95.7% | 55.8% |
| 3642926 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 56.0 | 4.05e-01 | 100.0% | 38.4% |
| 5045102 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 46.0 | 4.17e-01 | 84.1% | 60.0% |
| 3893747 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.59 | 50.0 | 3.93e-01 | 94.2% | 64.7% |
| 3258377 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.59 | 42.0 | 3.87e-01 | 87.0% | 57.8% |
| 3373621 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.23e-01 | 82.6% | 87.5% |
| 3487253 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 51.0 | 4.32e-01 | 100.0% | 84.5% |
| 4481633 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.56 | 47.0 | 3.85e-01 | 92.8% | 67.2% |
| 3967332 | 4.1.1.181 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1820 | 0.55 | 47.0 | 4.44e-01 | 100.0% | 82.4% |
| 3714873 | 4.1.1.4 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e | 0.55 | 51.0 | 3.88e-01 | 100.0% | 48.7% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.55 | 47.0 | 4.22e-01 | 100.0% | 74.0% |
| 3648015 | 9.1.1.21 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind | 0.55 | 48.0 | 3.64e-01 | 100.0% | 77.1% |
| 3330406 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 41.0 | 4.27e-01 | 95.7% | 96.7% |
| 3487833 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 45.0 | 2.83e-01 | 97.1% | 23.4% |
| 3933721 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.52 | 41.0 | 3.17e-01 | 89.9% | 74.5% |
| 3597659 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 42.0 | 3.57e-01 | 98.6% | 84.3% |
| 4941717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.36e-01 | 81.2% | 94.3% |
| 3798295 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.51 | 41.0 | 3.10e-01 | 91.3% | 74.1% |
| 3587958 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 40.0 | 3.75e-01 | 100.0% | 70.0% |