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P0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00353
Bact-VirP0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00353
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-73
Domain cluster:
rep: NC_048077.1__YP_009813735.1__HOU32_gp290__00290__D8-67
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cwvA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.64 | 57.0 | 4.09e-01 | 100.0% | 76.3% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.63 | 38.0 | 3.56e-01 | 77.6% | 48.2% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.63 | 55.0 | 4.12e-01 | 100.0% | 48.6% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 3.84e-01 | 74.6% | 97.1% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.62 | 52.0 | 3.89e-01 | 100.0% | 75.8% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.62 | 54.0 | 4.01e-01 | 100.0% | 77.0% |
| 2knrA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.62 | 50.0 | 4.24e-01 | 92.5% | 60.2% |
| 3qdkA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 51.0 | 3.49e-01 | 98.5% | 84.1% |
| 3i8bA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 50.0 | 3.58e-01 | 98.5% | 90.7% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 42.0 | 3.84e-01 | 77.6% | 80.9% |
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.59 | 40.0 | 3.61e-01 | 74.6% | 51.6% |
| 4zfvB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 50.0 | 3.73e-01 | 100.0% | 92.0% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 44.0 | 3.82e-01 | 80.6% | 66.0% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.56 | 46.0 | 3.62e-01 | 94.0% | 75.3% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.54e-01 | 82.1% | 45.8% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.61e-01 | 86.6% | 100.0% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 36.0 | 2.94e-01 | 70.1% | 36.8% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 47.0 | 2.95e-01 | 100.0% | 66.8% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 42.0 | 2.96e-01 | 85.1% | 27.4% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.74e-01 | 83.6% | 65.6% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 40.0 | 3.44e-01 | 83.6% | 88.3% |
| 1vu2300 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.29e-01 | 82.1% | 46.5% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 40.0 | 2.77e-01 | 80.6% | 24.8% |
| 1uasA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 35.0 | 3.19e-01 | 88.1% | 51.1% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 34.0 | 2.48e-01 | 100.0% | 22.4% |
| 3f1jA00 | 2.70.20.40 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein | 0.53 | 40.0 | 3.16e-01 | 82.1% | 46.4% |
| 6x3aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.57e-01 | 86.6% | 99.0% |
| 1vwxB03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.52 | 40.0 | 3.32e-01 | 85.1% | 96.7% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 39.0 | 2.75e-01 | 82.1% | 25.6% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 36.0 | 2.90e-01 | 74.6% | 58.5% |
| 3glaA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.41e-01 | 82.1% | 71.1% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.58e-01 | 88.1% | 98.9% |
| 5hexA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.50 | 39.0 | 2.75e-01 | 92.5% | 80.1% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3190980 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.66 | 57.0 | 4.33e-01 | 98.5% | 77.0% |
| 3723694 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 50.0 | 3.84e-01 | 82.1% | 36.7% |
| 4951143 | 295.1.1.53 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 | 0.64 | 46.0 | 4.98e-01 | 76.1% | 92.7% |
| 4344687 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.64 | 46.0 | 3.94e-01 | 82.1% | 48.6% |
| 3690327 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.63 | 46.0 | 3.93e-01 | 77.6% | 73.6% |
| 3931058 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.62 | 44.0 | 3.85e-01 | 77.6% | 48.6% |
| 3390656 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 46.0 | 2.59e-01 | 80.6% | 9.8% |
| 3614586 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.61 | 44.0 | 3.72e-01 | 77.6% | 44.1% |
| 3647627 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.60 | 53.0 | 4.14e-01 | 100.0% | 70.0% |
| 3761877 | 391.1.2.13 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1-VW_OTOGL | 0.60 | 47.0 | 3.41e-01 | 91.0% | 32.4% |
| 4183880 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.60 | 52.0 | 3.27e-01 | 100.0% | 95.4% |
| 3933099 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.59 | 40.0 | 3.70e-01 | 76.1% | 55.3% |
| 5018419 | 2484.1.1.139 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF429 | 0.59 | 50.0 | 3.55e-01 | 100.0% | 97.4% |
| 4989944 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.59 | 42.0 | 2.65e-01 | 83.6% | 13.3% |
| 4605696 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.59 | 52.0 | 3.77e-01 | 100.0% | 90.0% |
| 3938829 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 42.0 | 2.65e-01 | 79.1% | 19.5% |
| 3824446 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 45.0 | 3.57e-01 | 85.1% | 52.1% |
| 3668083 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 49.0 | 3.76e-01 | 97.0% | 67.9% |
| 3257804 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.57 | 50.0 | 3.51e-01 | 98.5% | 97.7% |
| 3965166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 4.00e-01 | 85.1% | 66.7% |
| 3401290 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 41.0 | 3.33e-01 | 80.6% | 42.5% |
| 4486835 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.56 | 47.0 | 4.00e-01 | 98.5% | 89.2% |
| 3647116 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.56 | 44.0 | 3.63e-01 | 86.6% | 66.4% |
| 3639738 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.56 | 42.0 | 4.24e-01 | 83.6% | 82.1% |
| 2411327 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.54 | 45.0 | 3.75e-01 | 94.0% | 99.2% |
| 3389979 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 41.0 | 3.39e-01 | 80.6% | 50.8% |
| 3616441 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 40.0 | 3.32e-01 | 79.1% | 50.0% |
| 3940677 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 46.0 | 3.37e-01 | 97.0% | 57.4% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.70e-01 | 83.6% | 75.0% |
| 3248540 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 39.0 | 3.36e-01 | 80.6% | 55.5% |
| 3464766 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 38.0 | 3.15e-01 | 80.6% | 46.7% |
| 3627506 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 38.0 | 3.29e-01 | 79.1% | 56.4% |
| 3652333 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 38.0 | 3.39e-01 | 80.6% | 61.2% |
| 3738837 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.52 | 41.0 | 2.99e-01 | 86.6% | 76.0% |
| 4024062 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.73e-01 | 80.6% | 94.6% |
| 3209095 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 37.0 | 3.01e-01 | 79.1% | 79.3% |
| 4504922 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.51 | 40.0 | 3.89e-01 | 91.0% | 77.3% |
| 3496143 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.51 | 44.0 | 3.46e-01 | 98.5% | 47.6% |
| 3721598 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 37.0 | 3.17e-01 | 83.6% | 88.5% |
| 3505860 | 221.4.1.18 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N | 0.50 | 39.0 | 2.72e-01 | 88.1% | 58.8% |