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P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00038
Bact-VirP0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00038
Identity
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-69
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rckA01 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.62 | 43.0 | 2.93e-01 | 72.1% | 34.9% |
| 2qrdA00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.62 | 42.0 | 3.47e-01 | 70.5% | 56.1% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.57 | 40.0 | 3.08e-01 | 73.8% | 85.7% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 43.0 | 3.57e-01 | 86.9% | 75.2% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.14e-01 | 88.5% | 77.9% |
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 38.0 | 2.99e-01 | 70.5% | 59.0% |
| 2w5nA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 42.0 | 2.70e-01 | 86.9% | 54.2% |
| 3wpwA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.55 | 42.0 | 3.28e-01 | 86.9% | 99.3% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 37.0 | 2.73e-01 | 70.5% | 31.1% |
| 2zovA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.54 | 42.0 | 3.25e-01 | 91.8% | 90.4% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 38.0 | 2.83e-01 | 72.1% | 89.5% |
| 5x6vF00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 37.0 | 3.01e-01 | 100.0% | 37.3% |
| 8ckpA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 2.66e-01 | 85.2% | 28.4% |
| 6em3x01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.53 | 41.0 | 3.12e-01 | 95.1% | 50.8% |
| 4l1nA00 | 2.40.128.660 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 | 0.52 | 40.0 | 3.05e-01 | 86.9% | 82.6% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 39.0 | 2.88e-01 | 86.9% | 56.1% |
| 4i2yA01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 39.0 | 2.60e-01 | 80.3% | 100.0% |
| 2pfcA00 | 3.10.129.30 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain | 0.52 | 34.0 | 2.50e-01 | 90.2% | 26.2% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.77e-01 | 98.4% | 72.0% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.51 | 37.0 | 2.93e-01 | 80.3% | 42.1% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.51 | 39.0 | 3.12e-01 | 90.2% | 45.9% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.51 | 36.0 | 3.05e-01 | 77.0% | 84.7% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.34e-01 | 93.4% | 66.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 48.0 | 2.91e-01 | 72.1% | 24.0% |
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.68 | 46.0 | 4.27e-01 | 70.5% | 53.8% |
| 3597697 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.68 | 47.0 | 3.23e-01 | 72.1% | 28.5% |
| 3233381 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.67 | 49.0 | 3.04e-01 | 77.0% | 27.4% |
| 3416181 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 46.0 | 2.86e-01 | 75.4% | 12.7% |
| 4142474 | 5.1.4.357 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDCP | 0.65 | 48.0 | 2.94e-01 | 78.7% | 73.5% |
| 3822963 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 53.0 | 4.08e-01 | 88.5% | 50.8% |
| 3460207 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.64 | 48.0 | 3.14e-01 | 82.0% | 95.9% |
| 3421076 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.60 | 48.0 | 3.08e-01 | 90.2% | 81.0% |
| 4666231 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.60 | 42.0 | 3.07e-01 | 75.4% | 46.9% |
| 4013354 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.58 | 48.0 | 3.06e-01 | 93.4% | 22.6% |
| 4460236 | 2484.1.1.232 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EutA | 0.56 | 38.0 | 2.95e-01 | 70.5% | 54.2% |
| 4028149 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 39.0 | 3.53e-01 | 85.2% | 50.5% |
| 3618875 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 40.0 | 3.10e-01 | 77.0% | 91.9% |
| 3696734 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 42.0 | 2.90e-01 | 88.5% | 22.9% |
| 3738388 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.54 | 45.0 | 2.86e-01 | 93.4% | 91.8% |
| 3509056 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.52 | 37.0 | 2.99e-01 | 75.4% | 97.6% |
| 3431869 | 220.1.1.180 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7642 | 0.52 | 41.0 | 3.45e-01 | 90.2% | 72.7% |
| 3470080 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 39.0 | 3.71e-01 | 93.4% | 69.6% |
| 4975639 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 42.0 | 3.38e-01 | 95.1% | 72.3% |