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P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00070
Bact-VirP0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00070
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-130
Domain cluster:
rep: RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00576__D4-143
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.73 | 39.0 | 4.80e-01 | 87.4% | 80.5% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 34.0 | 4.38e-01 | 82.7% | 77.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 41.0 | 5.09e-01 | 92.1% | 94.7% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.69 | 51.0 | 5.46e-01 | 91.3% | 88.9% |
| 2ihmB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.66 | 39.0 | 4.11e-01 | 84.3% | 64.0% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 36.0 | 4.43e-01 | 90.6% | 83.7% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.66 | 43.0 | 5.05e-01 | 92.1% | 96.6% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.66 | 37.0 | 4.32e-01 | 85.8% | 77.8% |
| 1q9uA00 | 3.30.310.70 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain | 0.65 | 52.0 | 5.26e-01 | 85.8% | 97.7% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.64 | 37.0 | 4.38e-01 | 91.3% | 83.5% |
| 1jg8A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 32.0 | 3.61e-01 | 85.8% | 64.6% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 38.0 | 4.02e-01 | 83.5% | 69.6% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 34.0 | 3.70e-01 | 89.8% | 66.3% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 49.0 | 4.44e-01 | 87.4% | 87.5% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 37.0 | 4.40e-01 | 100.0% | 97.6% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.58 | 45.0 | 4.37e-01 | 91.3% | 74.3% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.58 | 29.0 | 3.48e-01 | 73.2% | 70.5% |
| 3n01A00 | 3.30.70.2470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein-tyrosine phosphatase receptor IA-2 ectodomain | 0.58 | 38.0 | 4.37e-01 | 91.3% | 96.6% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 41.0 | 3.27e-01 | 74.8% | 59.1% |
| 3nr5A00 | 3.40.1000.50 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Repressor of RNA polymerase III transcription Maf1 | 0.57 | 40.0 | 3.76e-01 | 72.4% | 82.8% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 4.14e-01 | 91.3% | 80.2% |
| 4hvmB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 48.0 | 4.22e-01 | 92.1% | 79.3% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 31.0 | 3.79e-01 | 92.9% | 85.7% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.56 | 51.0 | 4.94e-01 | 97.6% | 98.6% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 33.0 | 3.51e-01 | 72.4% | 65.7% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.97e-01 | 89.8% | 73.6% |
| 7ovuA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.86e-01 | 85.0% | 95.9% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 33.0 | 4.06e-01 | 89.8% | 100.0% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 3.76e-01 | 81.1% | 71.9% |
| 2jgpA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 46.0 | 4.05e-01 | 92.9% | 80.7% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 4.41e-01 | 96.1% | 98.1% |
| 1ap8A00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.54 | 38.0 | 3.29e-01 | 74.0% | 84.0% |
| 6mfxA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 43.0 | 4.02e-01 | 86.6% | 75.0% |
| 4lrjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 27.0 | 3.28e-01 | 89.8% | 78.1% |
| 1m5hA02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.91e-01 | 100.0% | 71.2% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.53 | 36.0 | 4.01e-01 | 91.3% | 93.6% |
| 2cxiA02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.52 | 46.0 | 4.01e-01 | 97.6% | 94.9% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 37.0 | 4.09e-01 | 96.9% | 93.9% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.78e-01 | 85.0% | 87.8% |
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 31.0 | 3.53e-01 | 86.6% | 84.3% |
| 1zavA01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.51 | 41.0 | 4.07e-01 | 100.0% | 82.2% |
| 6tpiB01 | 3.30.70.3040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.95e-01 | 89.0% | 95.8% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.50 | 43.0 | 4.05e-01 | 92.1% | 97.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4178706 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.74 | 46.0 | 5.21e-01 | 85.8% | 82.1% |
| 5049183 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.73 | 53.0 | 5.52e-01 | 91.3% | 80.5% |
| 3743072 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.71 | 61.0 | 5.86e-01 | 92.1% | 81.4% |
| 4946323 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.68 | 57.0 | 5.95e-01 | 93.7% | 97.4% |
| 4165624 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.68 | 42.0 | 4.97e-01 | 92.9% | 91.8% |
| 4311488 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.66 | 40.0 | 4.75e-01 | 91.3% | 95.0% |
| 1036625 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.65 | 38.0 | 4.55e-01 | 91.3% | 91.0% |
| 4264245 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.64 | 42.0 | 4.85e-01 | 95.3% | 93.3% |
| 3271422 | 304.159.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB | 0.64 | 41.0 | 4.82e-01 | 91.3% | 96.5% |
| 3285111 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 32.0 | 4.14e-01 | 89.0% | 90.8% |
| 4034136 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.63 | 52.0 | 3.92e-01 | 88.2% | 44.0% |
| 4207299 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.63 | 36.0 | 4.42e-01 | 91.3% | 93.3% |
| 3996298 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 37.0 | 4.37e-01 | 91.3% | 91.3% |
| 4975395 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 40.0 | 4.82e-01 | 91.3% | 98.8% |
| 3536760 | 304.7.1.20 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › MBTP1_N | 0.62 | 37.0 | 4.41e-01 | 91.3% | 92.5% |
| 3406890 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.61 | 38.0 | 4.37e-01 | 91.3% | 86.7% |
| 3880784 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 38.0 | 4.31e-01 | 91.3% | 83.9% |
| 3308587 | 304.5.1.25 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V-ATPase_C | 0.61 | 37.0 | 3.99e-01 | 93.7% | 70.0% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.60 | 37.0 | 4.21e-01 | 90.6% | 82.1% |
| 4933229 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.60 | 42.0 | 3.40e-01 | 99.2% | 37.4% |
| 3393757 | 387.1.5.16 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Tsg | 0.60 | 32.0 | 3.80e-01 | 82.7% | 75.3% |
| 3883867 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.59 | 36.0 | 4.14e-01 | 91.3% | 87.1% |
| 4988706 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.58 | 32.0 | 3.74e-01 | 91.3% | 77.6% |
| 4983540 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.56 | 32.0 | 3.93e-01 | 84.3% | 89.7% |
| 3173903 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 33.0 | 3.57e-01 | 89.8% | 66.4% |
| 3415955 | 304.126.1.2 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.56 | 36.0 | 3.76e-01 | 96.1% | 70.4% |
| 3659633 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.55 | 37.0 | 4.18e-01 | 90.6% | 90.5% |
| 3460220 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.55 | 40.0 | 3.75e-01 | 74.8% | 98.1% |
| 3365648 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.55 | 38.0 | 4.04e-01 | 90.6% | 79.1% |
| 3414956 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 46.0 | 3.88e-01 | 92.1% | 89.3% |
| 3926978 | 109.4.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 | 0.54 | 43.0 | 2.80e-01 | 85.8% | 55.9% |
| 4201083 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.54 | 36.0 | 3.94e-01 | 91.3% | 85.0% |
| 4148915 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.54 | 46.0 | 2.89e-01 | 95.3% | 68.3% |
| 4671096 | 304.4.1.54 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless | 0.54 | 39.0 | 3.89e-01 | 91.3% | 73.1% |
| 3331686 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.53 | 25.0 | 2.88e-01 | 74.0% | 58.9% |
| 4048122 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.53 | 39.0 | 3.90e-01 | 100.0% | 74.6% |
| 4962506 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.53 | 30.0 | 3.68e-01 | 88.2% | 97.1% |
| 3999180 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.52 | 32.0 | 3.90e-01 | 73.2% | 92.9% |
| 4944666 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.52 | 30.0 | 3.13e-01 | 92.1% | 60.0% |
| 4026422 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.52 | 44.0 | 4.46e-01 | 91.3% | 92.0% |
| 137904 | 642.1.1.1 ↗ | a+b three layers › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › SUFU | 0.52 | 41.0 | 3.66e-01 | 85.0% | 84.6% |
| 3346483 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 32.0 | 3.78e-01 | 95.3% | 95.3% |
| 3450392 | 323.1.1.8 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_cat | 0.50 | 46.0 | 4.09e-01 | 100.0% | 89.4% |
| 3206278 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 44.0 | 4.12e-01 | 96.9% | 91.3% |
| 1513992 | 317.1.1.4 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › HopA1 | 0.50 | 43.0 | 3.48e-01 | 95.3% | 63.8% |
| 5017910 | 213.1.1.21 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C | 0.50 | 43.0 | 3.67e-01 | 96.9% | 84.5% |
| 3745161 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.50 | 36.0 | 3.97e-01 | 91.3% | 95.0% |
D2
medium
residues 133-161
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.75 | 57.0 | 3.61e-01 | 100.0% | 18.4% |
| 3b0dB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 53.0 | 3.90e-01 | 96.6% | 29.5% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.67 | 49.0 | 3.84e-01 | 82.8% | 84.6% |
| 3b4sA01 | 1.10.287.790 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › luxt domain from vibrio parahaemolyticus | 0.66 | 52.0 | 4.48e-01 | 100.0% | 53.1% |
| 2ql2C00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.66 | 49.0 | 4.08e-01 | 96.6% | 43.1% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 50.0 | 3.74e-01 | 86.2% | 34.2% |
| 3hh0A02 | 6.10.250.360 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 49.0 | 4.18e-01 | 96.6% | 50.0% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.65 | 50.0 | 3.52e-01 | 93.1% | 26.3% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.65 | 48.0 | 4.21e-01 | 79.3% | 80.0% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.64 | 50.0 | 3.53e-01 | 100.0% | 27.4% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 49.0 | 3.09e-01 | 100.0% | 41.2% |
| 7f0aA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.63 | 48.0 | 3.00e-01 | 93.1% | 14.2% |
| 1ihuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 2.98e-01 | 96.6% | 11.4% |
| 3u7eB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 49.0 | 3.02e-01 | 89.7% | 50.0% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 3.21e-01 | 79.3% | 97.6% |
| 3sllA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.60 | 44.0 | 3.71e-01 | 96.6% | 44.3% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 43.0 | 3.21e-01 | 82.8% | 26.4% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 39.0 | 2.77e-01 | 100.0% | 21.6% |
| 4fcgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.54 | 43.0 | 2.50e-01 | 100.0% | 15.2% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.53 | 38.0 | 2.65e-01 | 100.0% | 96.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3957955 | 605.1.1.13 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Transposase_mut | 0.68 | 53.0 | 3.98e-01 | 100.0% | 35.6% |
| 5035734 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.67 | 55.0 | 3.68e-01 | 100.0% | 24.8% |
| 4996616 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 4.40e-01 | 100.0% | 49.2% |
| 3790605 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.66 | 54.0 | 3.64e-01 | 100.0% | 24.8% |
| 5080189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 46.0 | 3.41e-01 | 100.0% | 29.1% |
| 3434585 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 51.0 | 2.94e-01 | 93.1% | 11.3% |
| 3362021 | 397.3.1.0 ↗ | few secondary structure elements › Toxic hairpin › Pollen allergen ole e 6 › Pollen allergen ole e 6 | 0.62 | 45.0 | 4.48e-01 | 100.0% | 82.9% |
| 4014950 | 3923.1.1.0 ↗ | alpha bundles › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain | 0.62 | 50.0 | 3.94e-01 | 100.0% | 41.4% |
| 3953696 | 5051.1.1.14 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › DUF475 | 0.61 | 52.0 | 2.94e-01 | 100.0% | 8.3% |
| 2387775 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.60 | 47.0 | 3.09e-01 | 93.1% | 24.8% |
| 3234298 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 47.0 | 3.91e-01 | 93.1% | 52.7% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.57 | 47.0 | 3.13e-01 | 100.0% | 19.3% |
| 4032348 | 2004.1.1.347 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_24 | 0.56 | 37.0 | 2.34e-01 | 100.0% | 26.8% |