←Back to structures

P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00202

Bact-Vir

P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00202

Identity

Kingdom:
phage

Quality

71.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-72
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.04e-01 86.2% 100.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.53 40.0 3.88e-01 87.7% 72.7%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 4.07e-01 89.2% 95.0%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.52e-01 75.4% 68.5%
2xgjA05 2.40.30.300 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 38.0 3.19e-01 87.7% 72.3%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3555838 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 47.0 4.36e-01 100.0% 84.4%
4878500 5077.1.1.5 ↗ extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › PSI_PsaE 0.56 39.0 4.16e-01 84.6% 94.1%
3831450 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 47.0 4.31e-01 100.0% 87.8%
3683669 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 3.65e-01 86.2% 88.6%
3937006 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 3.97e-01 86.2% 84.6%
3514185 5.1.4.255 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.51 38.0 2.39e-01 83.1% 40.3%
4013406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 38.0 3.72e-01 87.7% 93.3%