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P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00244
Bact-VirP0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00244
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-53
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r6fA04 | 1.10.8.280 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like | 0.59 | 40.0 | 3.17e-01 | 73.1% | 99.2% |
| 4gywA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 42.0 | 3.36e-01 | 78.8% | 65.8% |
| 2g5dA02 | 2.40.240.50 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Barwin-like endoglucanases | 0.52 | 36.0 | 2.77e-01 | 73.1% | 54.9% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 37.0 | 3.19e-01 | 82.7% | 58.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938133 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.84 | 70.0 | 5.86e-01 | 92.3% | 55.3% |
| 3892496 | 260.1.1.0 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat | 0.62 | 42.0 | 3.44e-01 | 71.2% | 64.0% |
| 3462917 | 304.9.1.7 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › XS | 0.50 | 42.0 | 3.01e-01 | 100.0% | 49.4% |