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P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00255
Bact-VirP0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00255
Identity
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-81
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.82 | 39.0 | 3.67e-01 | 86.3% | 39.5% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 45.0 | 3.95e-01 | 72.6% | 78.4% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 30.0 | 2.48e-01 | 84.9% | 24.6% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 34.0 | 2.98e-01 | 91.8% | 35.4% |
| 3p06A00 | 3.30.230.110 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.60 | 44.0 | 3.30e-01 | 79.5% | 88.1% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 44.0 | 2.86e-01 | 83.6% | 99.7% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 40.0 | 3.34e-01 | 84.9% | 47.1% |
| 4wy5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 2.82e-01 | 87.7% | 97.5% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.54 | 42.0 | 3.41e-01 | 84.9% | 83.8% |
| 1jjfA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 39.0 | 2.68e-01 | 78.1% | 77.6% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 40.0 | 3.34e-01 | 80.8% | 72.4% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.77e-01 | 86.3% | 96.9% |
| 7mwzD01 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.52 | 42.0 | 3.08e-01 | 84.9% | 55.6% |
| 3zkbI02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 42.0 | 3.28e-01 | 89.0% | 70.0% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 39.0 | 3.00e-01 | 80.8% | 56.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997778 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.67 | 47.0 | 3.77e-01 | 74.0% | 57.2% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.65 | 45.0 | 4.04e-01 | 72.6% | 54.8% |
| 5031715 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 45.0 | 3.69e-01 | 74.0% | 45.9% |
| 5072187 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.63 | 50.0 | 3.12e-01 | 87.7% | 76.7% |
| 4043361 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.62 | 43.0 | 2.73e-01 | 74.0% | 49.0% |
| 3738197 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 42.0 | 3.24e-01 | 72.6% | 90.9% |
| 4938400 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.58 | 40.0 | 3.49e-01 | 72.6% | 79.1% |
| 4930437 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.56 | 42.0 | 3.67e-01 | 78.1% | 100.0% |
| 3520868 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 3.20e-01 | 74.0% | 55.7% |
| 3170786 | 223.2.1.18 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 | 0.55 | 45.0 | 3.35e-01 | 86.3% | 74.9% |
| 3430888 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.55 | 41.0 | 2.47e-01 | 79.5% | 63.1% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.55 | 46.0 | 3.03e-01 | 90.4% | 57.7% |
| 3449886 | 2011.1.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14 | 0.54 | 45.0 | 2.97e-01 | 93.2% | 96.0% |
| 4972532 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.54 | 45.0 | 4.14e-01 | 87.7% | 84.4% |
| 3935989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 2.92e-01 | 95.9% | 77.8% |
| 5016315 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.53 | 38.0 | 3.25e-01 | 76.7% | 52.0% |
| 3624183 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 46.0 | 2.89e-01 | 93.2% | 75.5% |
| 3719807 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 41.0 | 3.27e-01 | 82.2% | 46.4% |
| 3347865 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.53 | 43.0 | 3.61e-01 | 87.7% | 95.0% |
| 344114 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.53 | 43.0 | 3.60e-01 | 89.0% | 90.3% |
| 3744517 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 39.0 | 3.29e-01 | 79.5% | 74.2% |
| 5021851 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.52 | 44.0 | 2.86e-01 | 95.9% | 32.5% |
| 3179206 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 32.0 | 3.16e-01 | 87.7% | 59.5% |
| 3353468 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 42.0 | 2.98e-01 | 89.0% | 77.6% |
| 4927397 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 37.0 | 2.91e-01 | 78.1% | 58.8% |
| 4949986 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.51 | 38.0 | 3.37e-01 | 80.8% | 68.2% |
| 3750853 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.51 | 44.0 | 3.70e-01 | 93.2% | 91.7% |
| 4144852 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.51 | 36.0 | 3.25e-01 | 75.3% | 59.3% |
| 3639782 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.50 | 38.0 | 3.14e-01 | 80.8% | 70.0% |