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P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00303

Bact-Vir

P0_An_pond3_S8_coassembly_k141_133253_prodigal-single.1__X__X__00303

Identity

Kingdom:
phage

Quality

79.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-54
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 67.0 6.19e-01 100.0% 73.0%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.75 58.0 5.72e-01 100.0% 79.6%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.14e-01 100.0% 79.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 58.0 5.81e-01 100.0% 88.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.33e-01 100.0% 70.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.03e-01 100.0% 61.6%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.50e-01 100.0% 88.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.65e-01 100.0% 90.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.51e-01 100.0% 88.2%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 5.74e-01 100.0% 93.2%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 5.13e-01 100.0% 69.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 56.0 5.24e-01 100.0% 80.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.72e-01 100.0% 96.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 60.0 5.73e-01 100.0% 87.7%
5hr9A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 44.0 3.46e-01 72.0% 31.8%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.13e-01 100.0% 79.7%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 47.0 4.42e-01 86.0% 61.2%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 55.0 4.55e-01 100.0% 60.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 5.39e-01 96.0% 100.0%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.63 50.0 4.18e-01 100.0% 97.2%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 49.0 4.68e-01 90.0% 73.8%
3d31A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.85e-01 86.0% 100.0%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 4.39e-01 86.0% 88.9%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.02e-01 100.0% 93.0%
1f2uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 3.60e-01 94.0% 37.6%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.60 49.0 3.77e-01 100.0% 94.7%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 44.0 4.05e-01 86.0% 83.3%
4da5A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 44.0 3.85e-01 86.0% 92.8%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.58 45.0 4.12e-01 88.0% 77.5%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 42.0 2.76e-01 80.0% 45.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.44e-01 100.0% 80.6%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 41.0 2.51e-01 78.0% 32.7%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.57 47.0 3.02e-01 100.0% 22.6%
2kjpA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 42.0 3.75e-01 84.0% 98.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 42.0 2.76e-01 84.0% 46.7%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.57 42.0 4.21e-01 82.0% 92.2%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.25e-01 88.0% 56.0%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 43.0 3.51e-01 92.0% 48.6%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 47.0 2.93e-01 100.0% 87.7%
4btfA03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 3.31e-01 84.0% 72.3%
2q7eA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 39.0 2.67e-01 76.0% 23.6%
1nw1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 3.50e-01 86.0% 81.2%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 46.0 4.04e-01 100.0% 86.6%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 44.0 2.84e-01 100.0% 44.5%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.64e-01 100.0% 65.7%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.55 36.0 3.70e-01 86.0% 70.0%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.07e-01 86.0% 34.6%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.54 43.0 3.54e-01 100.0% 89.4%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 37.0 2.76e-01 76.0% 26.0%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.53 40.0 3.73e-01 88.0% 75.7%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 41.0 2.66e-01 98.0% 43.3%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 37.0 3.40e-01 86.0% 55.3%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.51 39.0 3.20e-01 88.0% 41.9%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.33e-01 90.0% 48.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.91e-01 98.0% 89.2%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995784 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 79.0 6.85e-01 100.0% 69.3%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 66.0 6.40e-01 100.0% 78.2%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 67.0 6.36e-01 100.0% 75.0%
4963446 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.30e-01 100.0% 75.4%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 66.0 6.44e-01 100.0% 87.3%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 5.92e-01 100.0% 80.0%
3507003 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 5.88e-01 100.0% 86.7%
4280256 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 55.0 5.59e-01 100.0% 80.0%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 4.78e-01 100.0% 37.7%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.50e-01 100.0% 74.5%
4429179 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 56.0 5.80e-01 100.0% 91.1%
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.75 58.0 5.72e-01 100.0% 80.0%
3711384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.45e-01 100.0% 63.5%
4583465 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 56.0 5.61e-01 100.0% 84.0%
4550511 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.72 51.0 5.26e-01 96.0% 84.4%
3976834 4.1.1.156 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2158 0.72 56.0 5.68e-01 100.0% 88.0%
3708283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.14e-01 100.0% 82.4%
4668201 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 53.0 5.36e-01 100.0% 84.0%
3651961 4.1.1.251 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.70 56.0 5.48e-01 100.0% 81.8%
4962256 101.1.2.937 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25943 0.70 63.0 4.82e-01 100.0% 65.5%
5003400 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 57.0 4.42e-01 90.0% 55.2%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.03e-01 100.0% 84.7%
3420881 5.1.3.252 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF27637 0.69 45.0 5.04e-01 74.0% 97.1%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 56.0 5.52e-01 100.0% 88.9%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.29e-01 100.0% 76.7%
4347799 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.68 57.0 5.14e-01 100.0% 100.0%
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.68 58.0 4.95e-01 100.0% 62.4%
4057742 2.4.1.11 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.68 54.0 5.04e-01 92.0% 80.0%
490 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 56.0 5.08e-01 100.0% 73.0%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 54.0 5.34e-01 100.0% 87.3%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.40e-01 100.0% 42.6%
3247629 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 51.0 4.49e-01 88.0% 95.0%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.99e-01 100.0% 78.3%
3230503 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 47.0 3.26e-01 80.0% 23.7%
5001589 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.65 57.0 4.58e-01 100.0% 57.0%
4932460 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.65 51.0 4.76e-01 88.0% 96.8%
4110527 5.1.4.322 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_IFT122_1st 0.65 57.0 3.51e-01 100.0% 85.9%
4001112 10.1.1.23 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized 0.64 54.0 3.75e-01 98.0% 65.0%
4455179 5.1.4.293 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_EML_2 0.64 57.0 3.49e-01 100.0% 87.3%
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.52e-01 100.0% 70.0%
3609794 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 52.0 3.08e-01 92.0% 38.8%
3890456 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 56.0 3.45e-01 100.0% 87.3%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.63e-01 100.0% 97.6%
3717742 5.1.4.422 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Rol-3 0.62 50.0 2.78e-01 96.0% 11.0%
4034055 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.62 47.0 2.94e-01 88.0% 26.2%
3244960 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 44.0 3.91e-01 78.0% 74.7%
3473183 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.60 52.0 3.60e-01 98.0% 32.4%
4475796 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 4.28e-01 80.0% 100.0%
3604264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.08e-01 98.0% 66.0%
5014898 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 47.0 2.86e-01 96.0% 20.9%
5040837 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 50.0 4.47e-01 100.0% 100.0%
3457561 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.59 48.0 3.44e-01 100.0% 84.1%
3788239 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 44.0 2.84e-01 88.0% 27.5%
3637442 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.58 47.0 2.85e-01 94.0% 17.6%
4380184 9.11.1.1 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.57 47.0 4.04e-01 100.0% 95.5%
3240229 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.56 45.0 2.96e-01 100.0% 25.1%
2184 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 2.82e-01 100.0% 43.0%
4935682 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 42.0 4.12e-01 88.0% 83.6%
4012540 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 40.0 3.66e-01 88.0% 69.3%
3258369 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 37.0 3.87e-01 88.0% 100.0%
862 9.4.1.1 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.53 44.0 3.89e-01 100.0% 85.4%
3933015 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 39.0 4.00e-01 84.0% 98.0%
3988256 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 42.0 3.41e-01 94.0% 59.1%
3497350 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 42.0 3.01e-01 100.0% 70.5%