P1-2_fusion_protein

Euk-Vir

Brassica_yellows_virus

P1-2_fusion_protein__YP_004869991__Brassica_yellows_virus__1046403

Identity

71.4 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Sobelivirales› Solemoviridae› Polerovirus› Brassica_yellows_virus

TaxID: 1046403

View cluster (38 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 145-196

PDB

D2 medium residues 197-216_314-403

PDB

D3 medium residues 217-313

PDB

Domain cluster: rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02122.22 best	Peptidase_S39	116.8	1.30e-33	100.0%	46.3%

D4 medium residues 618-655_735-787_840-893

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	29.7	4.80e-07	40.0%	15.9%
PF02123.22	RdRP_4	56.1	4.50e-15	38.6%	12.7%

D5 medium residues 656-734

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337098__Changjiang_polero-like_virus_1__1922799__D1-82_112-138

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	36.1	5.40e-09	100.0%	19.1%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a98A02	1.20.1270.350	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain	0.55	38.0	3.68e-01	93.7%	64.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3851020	193.1.1.1 ↗	alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH	0.53	40.0	3.53e-01	82.3%	92.5%

D6 medium residues 969-1023

PDB

Domain cluster: rep: putative_protein_P2__YP_001931931__Tobacco_vein_distorting_virus__192203__D1031-1055_1057-1076_1079-1084