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P1-P2_fusion_protein
Euk-VirMelon_aphid-borne_yellows_virus
P1-P2_fusion_protein__YP_001949870__Melon_aphid-borne_yellows_virus__471717
Identity
- Accession:
- YP_001949870 ↗
- Protein ID:
- P1-P2_fusion_protein
- Kingdom:
- euk
Quality
73.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Sobelivirales›
Solemoviridae›
Polerovirus›
Melon_aphid-borne_yellows_virus
TaxID: 471717
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 198-215_302-422
Domain cluster:
rep: hypothetical_protein_1__YP_009337259__Shuangao_sobemo-like_virus_2__1923475__D83-106_193-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 131.9 | 3.40e-38 | 73.4% | 50.2% |
D2
medium
residues 216-301
Domain cluster:
rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 105.3 | 4.70e-30 | 100.0% | 41.4% |
D3
medium
residues 587-644_697-752_764-789
Domain cluster:
rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D698-776_892-917
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 29.2 | 6.60e-07 | 59.3% | 22.6% |
D4
medium
residues 667-677_816-883_909-975
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 41.9 | 9.00e-11 | 54.1% | 18.3% |
| PF02123.22 | RdRP_4 | 82.4 | 5.00e-23 | 47.9% | 16.8% |
D5
medium
residues 678-696_753-763_790-815_884-908
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 48.0 | 4.47e-01 | 97.5% | 94.1% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 3.44e-01 | 90.1% | 70.8% |
| 2i6hA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 33.0 | 3.18e-01 | 98.8% | 56.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3757869 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.56 | 36.0 | 3.47e-01 | 71.6% | 55.8% |
| 3325892 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.54 | 39.0 | 3.94e-01 | 76.5% | 80.0% |
| 4550256 | 604.12.1.76 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › IspA | 0.50 | 39.0 | 4.07e-01 | 96.3% | 92.0% |
D6
medium
residues 976-1056