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P1-P2_fusion_protein
Euk-VirStrawberry_polerovirus_1
P1-P2_fusion_protein__YP_009100303__Strawberry_polerovirus_1__1564903
Identity
- Accession:
- YP_009100303 ↗
- Protein ID:
- P1-P2_fusion_protein
- Kingdom:
- euk
Quality
70.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Sobelivirales›
Solemoviridae›
Polerovirus›
Strawberry_polerovirus_1
TaxID: 1564903
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 137-202
D2
medium
residues 203-224_315-438
Domain cluster:
rep: hypothetical_protein_1__YP_009337259__Shuangao_sobemo-like_virus_2__1923475__D83-106_193-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 90.5 | 1.50e-25 | 78.8% | 52.2% |
D3
medium
residues 225-314
Domain cluster:
rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 65.8 | 5.90e-18 | 100.0% | 41.4% |
D4
medium
residues 623-665_693-730_754-805_843-854
Domain cluster:
rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D698-776_892-917
D5
medium
residues 731-753_806-842_855-892_951-1027
Domain cluster:
rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 51.2 | 1.40e-13 | 55.4% | 20.6% |
| PF02123.22 | RdRP_4 | 67.6 | 1.50e-18 | 45.1% | 18.3% |
D6
medium
residues 893-950
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p86A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 42.0 | 3.09e-01 | 77.6% | 72.0% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.55 | 40.0 | 3.54e-01 | 82.8% | 54.3% |
| 1qqhA00 | 2.170.200.10 | Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain | 0.54 | 42.0 | 3.15e-01 | 84.5% | 69.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396852 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.61 | 46.0 | 3.52e-01 | 82.8% | 48.6% |
| 3520254 | 101.6.1.1 ↗ | alpha arrays › HTH › Protein serine/threonine phosphatase 2C-C › Protein serine/threonine phosphatase 2C-C › PP2C_C | 0.55 | 42.0 | 3.80e-01 | 79.3% | 61.3% |
| 2081233 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 39.0 | 2.57e-01 | 81.0% | 47.9% |
D7
medium
residues 1081-1130