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P12
Euk-VirOperophtera_brumata_nucleopolyhedrovirus
P12__YP_009552646__Operophtera_brumata_nucleopolyhedrovirus__1046267
Identity
- Accession:
- YP_009552646 ↗
- Protein ID:
- P12
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Operophtera_brumata_nucleopolyhedrovirus
TaxID: 1046267
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-116
Domain cluster:
rep: p12__YP_009112628__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D40-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06497.17 best | Baculo_Ac102 | 62.9 | 3.30e-17 | 100.0% | 77.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u5nA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.57 | 42.0 | 3.43e-01 | 80.3% | 45.8% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 46.0 | 3.85e-01 | 100.0% | 88.3% |
| 4og1A02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.55 | 33.0 | 3.43e-01 | 73.8% | 63.8% |
| 6fbtA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.53 | 38.0 | 3.53e-01 | 100.0% | 60.5% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 42.0 | 3.69e-01 | 93.4% | 92.8% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 39.0 | 2.96e-01 | 83.6% | 81.9% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.51 | 38.0 | 3.48e-01 | 85.2% | 84.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3795697 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.72 | 55.0 | 5.42e-01 | 83.6% | 84.6% |
| 5000777 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.64 | 54.0 | 4.74e-01 | 96.7% | 76.6% |
| 3724003 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.58 | 37.0 | 3.17e-01 | 70.5% | 40.0% |
| 3989675 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.57 | 48.0 | 3.96e-01 | 100.0% | 90.0% |
| 5051430 | 632.1.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › BE_C | 0.55 | 41.0 | 3.44e-01 | 85.2% | 70.0% |
| 5054165 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 3.18e-01 | 100.0% | 60.0% |
| 3718391 | 109.3.1.89 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › CECR6_TMEM121 | 0.51 | 39.0 | 2.69e-01 | 85.2% | 46.8% |
| 3659810 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.51 | 36.0 | 3.25e-01 | 75.4% | 85.9% |
| 3291702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 43.0 | 3.25e-01 | 96.7% | 70.6% |