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P1
Euk-VirDonkey_orchid_virus_A
P1__YP_007969884__Donkey_orchid_virus_A__1198144
Identity
- Accession:
- YP_007969884 ↗
- Protein ID:
- P1
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Donkey_orchid_virus_A
TaxID: 1198144
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 174-310
Domain cluster:
rep: P1__YP_006908980__Rose_yellow_mosaic_virus__1048434__D303-423
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01577.23 best | Peptidase_S30 | 88.0 | 1.10e-24 | 99.3% | 55.9% |
D2
medium
residues 35-89_108-121
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vklA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.86 | 49.0 | 4.68e-01 | 79.7% | 50.6% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 48.0 | 3.29e-01 | 85.5% | 51.2% |