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P1_protein
Euk-VirSugarcane_streak_mosaic_virus
P1_protein__YP_006423934__Sugarcane_streak_mosaic_virus__53954
Identity
- Accession:
- YP_006423934 ↗
- Protein ID:
- P1_protein
- Kingdom:
- euk
Quality
70.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Poacevirus›
Sugarcane_streak_mosaic_virus
TaxID: 53954
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 224-357
Domain cluster:
rep: P1__YP_006908980__Rose_yellow_mosaic_virus__1048434__D303-423
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13611.13 best | Peptidase_S76 | 50.7 | 3.10e-13 | 66.4% | 72.7% |
D2
medium
residues 31-127
Domain cluster:
rep: P1__YP_007032438__Cassava_brown_streak_virus__137758__D63-146
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1um8A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 37.0 | 3.70e-01 | 75.3% | 97.9% |