P1_protein

Euk-Vir

Tamarillo_leaf_malformation_virus

P1_protein__YP_009126861__Tamarillo_leaf_malformation_virus__945960

Identity

64.2 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Tamarillo_leaf_malformation_virus

TaxID: 945960

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 194-306

PDB

Domain cluster: rep: P1__YP_006908980__Rose_yellow_mosaic_virus__1048434__D303-423

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01577.23 best	Peptidase_S30	54.4	2.00e-14	99.1%	42.4%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2eyqA05	2.40.10.170	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.52	25.0	3.37e-01	91.2%	86.4%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3578128	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.58	26.0	3.50e-01	92.9%	81.8%
3722655	312.1.1.11 ↗	a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N	0.54	34.0	3.06e-01	90.3%	44.4%
5024985	2.4.1.0 ↗	beta barrels › OB-fold › MOP-like › MOP-like	0.53	20.0	2.45e-01	86.7%	50.0%
3930224	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.52	20.0	2.89e-01	91.2%	76.0%
3507677	101.35.1.25 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26215	0.52	33.0	3.59e-01	88.5%	77.4%
3622287	109.6.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N	0.50	41.0	2.89e-01	92.0%	47.0%