P24

Euk-Vir

Lonomia_obliqua_multiple_nucleopolyhedrovirus

P24__YP_009666389__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394

Identity

78.2 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lonomia_obliqua_multiple_nucleopolyhedrovirus

TaxID: 134394

View cluster (41 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-117

PDB

Domain cluster: rep: P24__YP_009182258__Diatraea_saccharalis_granulovirus__1675862__D8-93

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05073.18 best	Baculo_p24	145.4	2.00e-42	94.4%	61.9%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l2mA00	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.60	28.0	3.36e-01	71.0%	64.3%
4lduA02	2.40.330.10	Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain	0.60	35.0	3.53e-01	98.1%	57.5%
3nqzA02	3.10.450.40	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.57	27.0	3.05e-01	100.0%	56.0%
3itqA01	2.60.120.620	Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain	0.56	39.0	3.24e-01	99.1%	41.6%
5qinA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.50	36.0	3.97e-01	100.0%	96.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3832176	1.1.11.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3	0.63	33.0	3.96e-01	97.2%	77.1%
4626020	3604.1.1.1 ↗	a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion	0.61	38.0	4.36e-01	100.0%	86.7%
3287567	4312.1.1.0 ↗	a+b two layers › RelE-like › RelE-like › RelE-like	0.57	29.0	3.11e-01	100.0%	54.4%
3487827	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.51	41.0	2.83e-01	87.9%	59.5%

D2 medium residues 126-203

PDB

Domain cluster: rep: p24__YP_009255282__Catopsilia_pomona_nucleopolyhedrovirus__1850906__D145-227

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05073.18 best	Baculo_p24	28.1	2.40e-06	76.9%	32.5%