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P26B

Euk-Vir

Urbanus_proteus_nucleopolyhedrovirus

P26B__YP_009250032__Urbanus_proteus_nucleopolyhedrovirus__1675866

Identity

Accession:
YP_009250032 ↗
Protein ID:
P26B
Kingdom:
euk

Quality

79.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Urbanus_proteus_nucleopolyhedrovirus

TaxID: 1675866

Cluster

View cluster (50 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-171
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04766.19 best Baculo_p26 130.1 1.40e-37 96.7% 61.1%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ep5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 37.0 4.84e-01 85.0% 79.1%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 45.0 5.34e-01 85.0% 88.5%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 43.0 5.12e-01 96.7% 85.8%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 45.0 5.24e-01 85.0% 88.8%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 37.0 4.81e-01 96.7% 90.6%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 66.0 6.30e-01 100.0% 95.9%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 40.0 4.68e-01 96.7% 84.6%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 62.0 5.61e-01 100.0% 92.5%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 40.0 4.19e-01 71.2% 86.4%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 39.0 4.05e-01 71.2% 94.4%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 38.0 3.93e-01 70.6% 96.6%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 38.0 3.87e-01 71.2% 74.0%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 38.0 3.95e-01 70.6% 93.7%
2furB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 3.52e-01 70.6% 74.2%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 41.0 4.48e-01 96.7% 97.6%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.53 28.0 3.21e-01 80.4% 67.0%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 38.0 4.12e-01 84.3% 94.4%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 38.0 4.13e-01 84.3% 94.4%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 4.02e-01 84.3% 88.1%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2716345 1.4.1.1 ↗ beta barrels › cradle loop barrel › N-terminal domain of poxin › N-terminal domain of poxin › Baculo_p26 0.92 85.0 8.37e-01 99.3% 91.8%
3008894 1.4.1.1 ↗ beta barrels › cradle loop barrel › N-terminal domain of poxin › N-terminal domain of poxin › Baculo_p26 0.91 86.0 8.40e-01 100.0% 92.6%
3439936 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.69 62.0 5.05e-01 98.0% 93.7%
4620869 1.1.5.57 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.69 63.0 4.78e-01 100.0% 86.9%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.68 43.0 4.90e-01 88.9% 83.5%
3428120 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.68 62.0 5.00e-01 98.7% 91.7%
3517637 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.67 61.0 5.04e-01 98.0% 83.4%
140973 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.66 60.0 5.24e-01 98.0% 77.1%
3437290 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.65 59.0 5.24e-01 98.0% 84.7%
4015954 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 59.0 5.09e-01 100.0% 90.2%
3469033 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 58.0 4.94e-01 98.7% 83.6%
3816594 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.64 58.0 5.00e-01 98.7% 87.5%
3447254 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.64 58.0 5.12e-01 98.0% 83.2%
3186280 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.62 49.0 4.36e-01 82.4% 94.0%
3955284 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 44.0 4.64e-01 73.2% 82.1%
2429362 1.1.5.4 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S3 0.61 51.0 4.81e-01 98.0% 75.6%
4999024 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 41.0 3.84e-01 70.6% 90.7%
3279487 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 41.0 4.24e-01 70.6% 95.0%
60 1.1.5.36 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like 0.57 40.0 4.19e-01 71.2% 86.4%
3280029 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 43.0 4.60e-01 78.4% 91.9%
5018015 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 40.0 4.10e-01 70.6% 86.2%
3285845 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 43.0 4.50e-01 85.0% 94.9%
1866299 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 41.0 4.36e-01 85.0% 94.1%
3198252 1.1.17.4 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.52 48.0 4.63e-01 100.0% 89.4%
2455725 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.52 33.0 3.89e-01 81.0% 93.3%
4499041 1.1.5.57 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.52 44.0 3.99e-01 91.5% 77.6%
3783478 11.1.1.643 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 0.51 29.0 3.63e-01 70.6% 91.6%
3650296 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.50 27.0 3.38e-01 80.4% 84.2%
D2 high residues 178-235
PDB
Domain cluster: rep: p26__NP_613192__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D180-240