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P26

Euk-Vir

Spodoptera_exempta_nucleopolyhedrovirus

P26__YP_010086547__Spodoptera_exempta_nucleopolyhedrovirus__1242863

Identity

Accession:
YP_010086547 ↗
Protein ID:
P26
Kingdom:
euk

Quality

87.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Spodoptera_exempta_nucleopolyhedrovirus

TaxID: 1242863

Cluster

View cluster (50 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-174
PDB
Domain cluster: rep: P26B__YP_009250032__Urbanus_proteus_nucleopolyhedrovirus__1675866__D19-171
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04766.19 best Baculo_p26 165.5 2.10e-48 100.0% 50.6%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 45.0 5.27e-01 78.5% 94.1%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 50.0 5.36e-01 78.5% 99.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 45.0 4.96e-01 76.0% 85.9%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 49.0 4.93e-01 77.7% 88.5%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 40.0 4.66e-01 71.1% 88.2%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 49.0 4.97e-01 78.5% 88.9%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 45.0 5.00e-01 78.5% 93.7%
4lk4A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 47.0 4.66e-01 78.5% 82.4%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 45.0 4.78e-01 75.2% 86.9%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 41.0 4.64e-01 76.9% 91.3%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 52.0 4.40e-01 95.0% 58.9%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.58 42.0 3.78e-01 75.2% 95.4%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.58 40.0 4.16e-01 71.9% 94.8%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 42.0 4.26e-01 76.9% 90.7%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 40.0 4.21e-01 76.0% 84.7%
5ccbA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.53 28.0 3.56e-01 73.6% 86.1%
4fxtA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.53 33.0 3.78e-01 83.5% 88.4%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 31.0 3.87e-01 81.8% 100.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 29.0 3.78e-01 84.3% 100.0%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 37.0 3.73e-01 73.6% 100.0%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 3.98e-01 76.0% 93.8%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3008894 1.4.1.1 ↗ beta barrels › cradle loop barrel › N-terminal domain of poxin › N-terminal domain of poxin › Baculo_p26 0.98 96.0 8.45e-01 100.0% 75.3%
2716345 1.4.1.1 ↗ beta barrels › cradle loop barrel › N-terminal domain of poxin › N-terminal domain of poxin › Baculo_p26 0.97 92.0 8.22e-01 100.0% 74.8%
4501706 1.4.1.0 ↗ beta barrels › cradle loop barrel › N-terminal domain of poxin › N-terminal domain of poxin 0.82 72.0 6.76e-01 100.0% 77.2%
3393350 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 60.0 5.00e-01 95.9% 75.6%
3198252 1.1.17.4 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.64 55.0 4.88e-01 91.7% 88.8%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 31.0 3.81e-01 71.9% 78.6%
2642578 1.1.13.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.61 43.0 4.53e-01 72.7% 95.5%
3801941 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.61 42.0 4.29e-01 70.2% 80.9%
4883825 1.1.13.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.60 41.0 4.64e-01 70.2% 95.7%
3719164 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 52.0 4.49e-01 95.0% 72.1%
1147338 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.59 52.0 4.99e-01 96.7% 85.9%
4995689 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.59 52.0 4.37e-01 95.0% 67.5%
4988103 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.59 41.0 4.56e-01 71.1% 97.9%
4614564 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.59 51.0 4.37e-01 95.0% 75.9%
3253266 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 35.0 3.69e-01 77.7% 65.7%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 33.0 3.74e-01 77.7% 77.6%
3394046 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.57 37.0 4.07e-01 79.3% 83.2%
3816110 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.56 51.0 4.16e-01 100.0% 67.6%
3945286 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 38.0 4.02e-01 70.2% 84.8%
3836865 4186.1.1.1 ↗ beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.52 38.0 3.95e-01 94.2% 81.7%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 29.0 3.06e-01 76.0% 58.2%
3602028 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 37.0 3.36e-01 75.2% 85.5%
D2 high residues 180-257
PDB
Domain cluster: rep: p26__NP_613192__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D180-240
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04766.19 best Baculo_p26 73.9 2.00e-20 100.0% 30.1%