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P33

Euk-Vir

Choristoneura_rosaceana_nucleopolyhedrovirus

P33__YP_008378415__Choristoneura_rosaceana_nucleopolyhedrovirus__58094

Identity

Accession:
YP_008378415 ↗
Protein ID:
P33
Kingdom:
euk

Quality

86.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Choristoneura_rosaceana_nucleopolyhedrovirus

TaxID: 58094

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-97
PDB
Domain cluster: rep: sulfhydrl_oxidase__YP_009049900__Peridroma_alphabaculovirus__1346829__D6-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05214.19 best Baculo_p33 107.6 1.10e-30 100.0% 36.8%
D2 medium residues 104-171
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05214.19 best Baculo_p33 106.9 1.80e-30 100.0% 27.5%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.74 51.0 5.46e-01 92.6% 86.0%
1ya0A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.68 58.0 4.22e-01 100.0% 46.6%
3jz0A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.67 59.0 4.79e-01 100.0% 93.8%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 54.0 4.72e-01 92.6% 89.0%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 51.0 4.58e-01 85.3% 73.5%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.66 56.0 4.64e-01 100.0% 57.1%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.65 48.0 3.84e-01 80.9% 39.4%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 51.0 4.81e-01 85.3% 95.1%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 55.0 4.45e-01 98.5% 88.1%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.64 56.0 4.72e-01 100.0% 63.5%
1q2lA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.63 51.0 3.61e-01 92.6% 52.6%
4i1eA03 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.58 50.0 4.04e-01 100.0% 94.2%
8cdaC01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.56 47.0 4.05e-01 98.5% 69.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491111 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 70.0 6.08e-01 100.0% 96.0%
3826145 1065.1.1.1 ↗ alpha bundles › SPX domain › SPX domain › SPX domain › SPX 0.75 67.0 4.63e-01 100.0% 67.1%
5039441 633.21.1.47 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › SPW 0.74 55.0 4.66e-01 79.4% 100.0%
3621977 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.73 53.0 4.43e-01 97.1% 45.2%
3786750 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.72 63.0 5.53e-01 100.0% 77.9%
1145724 601.21.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Baculo_p33 0.71 55.0 4.85e-01 100.0% 56.3%
3764851 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.69 52.0 4.78e-01 80.9% 76.7%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.69 61.0 4.69e-01 100.0% 60.0%
3471234 3832.1.1.1 ↗ alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.68 60.0 4.40e-01 100.0% 37.8%
3250840 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 58.0 5.56e-01 100.0% 91.1%
3630440 109.4.1.1328 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26034 0.66 56.0 4.83e-01 100.0% 83.5%
4998520 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.65 54.0 5.30e-01 100.0% 86.7%
3245544 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 57.0 4.83e-01 100.0% 73.9%
4944283 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.65 55.0 4.46e-01 100.0% 74.3%
2764889 4944.1.1.1 ↗ alpha bundles › Helical bundle in flu nucleocapsid protein › Helical bundle in flu nucleocapsid protein › Helical bundle in flu nucleocapsid protein › Flu_NP 0.64 55.0 4.56e-01 100.0% 64.6%
3225046 3198.1.1.1 ↗ alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.64 57.0 4.57e-01 98.5% 91.5%
3723690 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.62 52.0 4.40e-01 100.0% 71.2%
3605285 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 51.0 4.16e-01 100.0% 55.2%
5027414 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.61 52.0 4.40e-01 100.0% 96.7%
3593857 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 52.0 3.04e-01 100.0% 12.3%