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P33

Euk-Vir

Mocis_latipes_granulovirus

P33__YP_009249924__Mocis_latipes_granulovirus__2072024

Identity

Accession:: YP_009249924 ↗
Protein ID:: P33
Kingdom:: euk

Quality

90.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Mocis_latipes_granulovirus

TaxID: 2072024

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-153

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05214.19 best	Baculo_p33	188.5	2.20e-55	100.0%	59.9%

CATH (23)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rkoG00	1.10.287.3510	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.63	30.0	3.61e-01	100.0%	65.0%
2oezA02	1.10.3900.10	Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like	0.61	39.0	3.80e-01	97.3%	58.3%
3kavA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.61	36.0	4.25e-01	100.0%	85.3%
3zevB00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.59	48.0	3.77e-01	85.1%	80.6%
5figA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.59	35.0	4.15e-01	99.3%	86.0%
4xt1A00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.58	47.0	3.76e-01	85.1%	83.2%
2i53A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.58	33.0	3.74e-01	100.0%	72.1%
7dswA01	1.20.1530.20	Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold ›	0.58	50.0	3.70e-01	95.9%	84.9%
2nxpB00	1.25.40.500	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain	0.56	38.0	3.87e-01	100.0%	69.0%
3x3bA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	44.0	3.63e-01	84.5%	71.2%
2k3oA00	1.10.274.60	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain	0.55	41.0	4.36e-01	95.3%	89.1%
7q37A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	44.0	3.93e-01	85.1%	81.3%
2b5dX02	1.20.1430.10	Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain	0.55	32.0	3.58e-01	100.0%	72.8%
7cj3A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	38.0	3.22e-01	70.9%	63.2%
1at9A00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	43.0	3.74e-01	85.1%	76.1%
6gyhA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	43.0	3.78e-01	85.8%	78.7%
3caxA01	1.20.120.520	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like	0.53	41.0	3.54e-01	79.1%	73.3%
6k41R00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.52	41.0	3.52e-01	84.5%	77.8%
6k6iA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.52	42.0	3.66e-01	85.1%	77.6%
3t6aA00	1.10.840.10	Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain	0.51	42.0	3.39e-01	89.9%	85.4%
1otkA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	47.0	3.96e-01	100.0%	65.6%
3fseB02	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	43.0	4.42e-01	98.6%	93.8%
2q58B00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.50	40.0	3.08e-01	100.0%	37.7%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3572779	3855.1.1.1 ↗	alpha arrays › Serum amyloid A-1 protein › Serum amyloid A-1 protein › Serum amyloid A-1 protein › SAA	0.57	35.0	3.95e-01	97.3%	80.0%
3520208	5001.1.1.35 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srsx	0.57	46.0	3.60e-01	85.1%	74.5%
3436831	601.4.1.52 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › Auxin_canalis	0.54	37.0	3.92e-01	73.6%	77.7%
3409916	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.54	38.0	3.30e-01	100.0%	45.9%
5031827	601.7.1.2 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN	0.54	34.0	3.54e-01	96.6%	68.1%
4977769	5001.1.1.6 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin	0.54	39.0	3.53e-01	73.6%	81.5%
4173259	129.1.1.9 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C	0.53	43.0	4.19e-01	95.3%	79.4%
4341073	129.1.1.9 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C	0.52	42.0	4.19e-01	95.3%	83.0%
3896942	5059.1.1.0 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter	0.52	46.0	3.48e-01	100.0%	85.6%
3183807	601.14.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin	0.52	48.0	4.03e-01	100.0%	86.5%
3406386	129.1.1.9 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C	0.52	42.0	4.22e-01	95.3%	85.3%
3611697	1189.1.1.1 ↗	alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › Trypan_glycop	0.52	46.0	3.49e-01	99.3%	67.6%
3887418	633.21.1.46 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › TMEM125	0.51	37.0	3.75e-01	100.0%	73.3%

D2 medium residues 154-251

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05214.19 best	Baculo_p33	142.0	3.50e-41	99.0%	39.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.54	38.0	4.15e-01	77.6%	92.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3376682	5069.1.3.88 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PGG	0.54	45.0	4.42e-01	92.9%	89.5%