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P3
Euk-VirTobacco_vein_banding_mosaic_virus
P3__YP_001552414__Tobacco_vein_banding_mosaic_virus__33765
Identity
- Accession:
- YP_001552414 ↗
- Protein ID:
- P3
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Tobacco_vein_banding_mosaic_virus
TaxID: 33765
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-195
Domain cluster:
rep: P3__YP_009509100__Daphne_virus_Y__282712__D3-191
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13608.11 best | Potyvirid-P3 | 81.2 | 1.20e-22 | 89.2% | 33.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y8nA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.56 | 43.0 | 2.83e-01 | 80.0% | 98.2% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.55 | 24.0 | 3.17e-01 | 82.6% | 70.8% |
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.55 | 38.0 | 4.28e-01 | 82.1% | 92.4% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 31.0 | 3.88e-01 | 93.3% | 90.6% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.55 | 39.0 | 3.13e-01 | 73.8% | 93.3% |
| 3apzA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 39.0 | 3.44e-01 | 77.9% | 67.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786552 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.55 | 38.0 | 4.24e-01 | 100.0% | 88.7% |
| 3274860 | 109.25.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A | 0.53 | 36.0 | 3.71e-01 | 99.5% | 70.8% |
D2
medium
residues 240-290
Domain cluster:
representative
D3
medium
residues 291-347
Domain cluster:
rep: P3_protein__YP_001816828__Telosma_mosaic_virus__400394__D286-347