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P3
Euk-VirYam_mild_mosaic_virus
P3__YP_007001286__Yam_mild_mosaic_virus__87097
Identity
- Accession:
- YP_007001286 ↗
- Protein ID:
- P3
- Kingdom:
- euk
Quality
77.3
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Yam_mild_mosaic_virus
TaxID: 87097
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-188
Domain cluster:
rep: P3__YP_009509100__Daphne_virus_Y__282712__D3-191
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13608.11 best | Potyvirid-P3 | 88.6 | 6.70e-25 | 96.7% | 36.5% |
D2
high
residues 253-342
Domain cluster:
rep: third_protein__YP_008320584__Habenaria_mosaic_virus__1324128__D254-348
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fmnA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.73 | 47.0 | 4.82e-01 | 83.3% | 67.4% |
| 4f0uA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.65 | 44.0 | 3.64e-01 | 70.0% | 85.6% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 44.0 | 3.84e-01 | 86.7% | 66.7% |
| 6muwK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 35.0 | 2.77e-01 | 73.3% | 85.6% |